Cluster: MGYG000004335_CGC17
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004335
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004335_18 | MGYG000004335_18_2 | 1385 | 2815 | - | 2.A.66.2.23 |
| NULL(UNKNOWN) | MGYG000004335_18 | MGYG000004335_18_3 | 3316 | 4218 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004335_18 | MGYG000004335_18_4 | 4226 | 5176 | - | GT2 |
| NULL(UNKNOWN) | MGYG000004335_18 | MGYG000004335_18_5 | 5178 | 5342 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000004335_18 | MGYG000004335_18_6 | 5687 | 6829 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004335_18 | MGYG000004335_18_7 | 6826 | 7722 | - | GT2 |
| CAZyme | MGYG000004335_18 | MGYG000004335_18_8 | 7722 | 8513 | - | GT32 |
| pfam | MGYG000004335_18 | MGYG000004335_18_9 | 8518 | 9003 | - | Glyco_tran_28_C |
| pfam | MGYG000004335_18 | MGYG000004335_18_10 | 9015 | 9422 | - | Alg14 |
| TC | MGYG000004335_18 | MGYG000004335_18_11 | 9483 | 10247 | - | 9.B.18.1.2 |
Gene ID: MGYG000004335_18_2
Type: TC
Location: 1385 - 2815 (-)
Type: TC
Location: 1385 - 2815 (-)
Gene ID: MGYG000004335_18_3
Type:
Location: 3316 - 4218 (-)
Type:
Location: 3316 - 4218 (-)
Gene ID: MGYG000004335_18_4
Type: CAZyme
Location: 4226 - 5176 (-)
Type: CAZyme
Location: 4226 - 5176 (-)
Gene ID: MGYG000004335_18_5
Type:
Location: 5178 - 5342 (-)
Type:
Location: 5178 - 5342 (-)
Gene ID: MGYG000004335_18_6
Type:
Location: 5687 - 6829 (-)
Type:
Location: 5687 - 6829 (-)
Gene ID: MGYG000004335_18_7
Type: CAZyme
Location: 6826 - 7722 (-)
Type: CAZyme
Location: 6826 - 7722 (-)
Gene ID: MGYG000004335_18_8
Type: CAZyme
Location: 7722 - 8513 (-)
Type: CAZyme
Location: 7722 - 8513 (-)
Gene ID: MGYG000004335_18_9
Type: pfam
Location: 8518 - 9003 (-)
Type: pfam
Location: 8518 - 9003 (-)
Gene ID: MGYG000004335_18_10
Type: pfam
Location: 9015 - 9422 (-)
Type: pfam
Location: 9015 - 9422 (-)
Gene ID: MGYG000004335_18_11
Type: TC
Location: 9483 - 10247 (-)
Type: TC
Location: 9483 - 10247 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902494195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.