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Cluster: MGYG000004335_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004335_2 MGYG000004335_2_40 45382 45825 + 4.A.6.1.16
pfam MGYG000004335_2 MGYG000004335_2_41 45825 46106 + YajC
TC MGYG000004335_2 MGYG000004335_2_42 46143 46625 + 4.A.6.1.4
TC MGYG000004335_2 MGYG000004335_2_43 46716 47516 + 4.A.6.1.4
TC MGYG000004335_2 MGYG000004335_2_44 47506 48588 + 4.A.6.1.4
TF MGYG000004335_2 MGYG000004335_2_45 48774 49505 + GntR
STP MGYG000004335_2 MGYG000004335_2_46 49620 50786 + SIS | SIS
CAZyme MGYG000004335_2 MGYG000004335_2_47 50904 52073 + CE9
Gene ID: MGYG000004335_2_40
Type: TC
Location: 45382 - 45825 (+)
Gene ID: MGYG000004335_2_41
Type: pfam
Location: 45825 - 46106 (+)
Gene ID: MGYG000004335_2_42
Type: TC
Location: 46143 - 46625 (+)
Gene ID: MGYG000004335_2_43
Type: TC
Location: 46716 - 47516 (+)
Gene ID: MGYG000004335_2_44
Type: TC
Location: 47506 - 48588 (+)
Gene ID: MGYG000004335_2_45
Type: TF
Location: 48774 - 49505 (+)
Gene ID: MGYG000004335_2_46
Type: STP
Location: 49620 - 50786 (+)
Gene ID: MGYG000004335_2_47
Type: CAZyme
Location: 50904 - 52073 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004335_2_41 vegan > omnivore 1.06856 0.00566

🧭 Explore Read Mapping of CGC

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