Cluster: MGYG000004334_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: MGYG000004334
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004334_1 | MGYG000004334_1_116 | 131103 | 132380 | - | 2.A.37.2.2 |
| CAZyme | MGYG000004334_1 | MGYG000004334_1_117 | 133041 | 134951 | + | CBM48 | GH13_9 |
| pfam | MGYG000004334_1 | MGYG000004334_1_118 | 135082 | 136293 | + | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000004334_1 | MGYG000004334_1_119 | 136283 | 137395 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000004334_1 | MGYG000004334_1_120 | 137410 | 138837 | + | GT5 |
Gene ID: MGYG000004334_1_116
Type: TC
Location: 131103 - 132380 (-)
Type: TC
Location: 131103 - 132380 (-)
Gene ID: MGYG000004334_1_117
Type: CAZyme
Location: 133041 - 134951 (+)
Type: CAZyme
Location: 133041 - 134951 (+)
Gene ID: MGYG000004334_1_118
Type: pfam
Location: 135082 - 136293 (+)
Type: pfam
Location: 135082 - 136293 (+)
Gene ID: MGYG000004334_1_119
Type: pfam
Location: 136283 - 137395 (+)
Type: pfam
Location: 136283 - 137395 (+)
Gene ID: MGYG000004334_1_120
Type: CAZyme
Location: 137410 - 138837 (+)
Type: CAZyme
Location: 137410 - 138837 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp002493635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.