Cluster: MGYG000004334_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004334
- CGC Family ID: CGCFAM_00234
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004334_1 | MGYG000004334_1_73 | 76664 | 77119 | + | 9.A.11.1.1 |
| pfam | MGYG000004334_1 | MGYG000004334_1_74 | 77373 | 80063 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2 |
| pfam | MGYG000004334_1 | MGYG000004334_1_75 | 80406 | 80960 | - | PAP2 | PAP2_3 |
| TC | MGYG000004334_1 | MGYG000004334_1_76 | 81143 | 82153 | - | 9.A.11.1.1 |
| pfam | MGYG000004334_1 | MGYG000004334_1_77 | 82207 | 84093 | - | VanW |
| CAZyme | MGYG000004334_1 | MGYG000004334_1_78 | 84459 | 85589 | + | GT28 |
Gene ID: MGYG000004334_1_73
Type: TC
Location: 76664 - 77119 (+)
Type: TC
Location: 76664 - 77119 (+)
Gene ID: MGYG000004334_1_74
Type: pfam
Location: 77373 - 80063 (-)
Type: pfam
Location: 77373 - 80063 (-)
Gene ID: MGYG000004334_1_75
Type: pfam
Location: 80406 - 80960 (-)
Type: pfam
Location: 80406 - 80960 (-)
Gene ID: MGYG000004334_1_76
Type: TC
Location: 81143 - 82153 (-)
Type: TC
Location: 81143 - 82153 (-)
Gene ID: MGYG000004334_1_77
Type: pfam
Location: 82207 - 84093 (-)
Type: pfam
Location: 82207 - 84093 (-)
Gene ID: MGYG000004334_1_78
Type: CAZyme
Location: 84459 - 85589 (+)
Type: CAZyme
Location: 84459 - 85589 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp002493635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.