Cluster: MGYG000004334_CGC17
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004334
- CGC Family ID: CGCFAM_00195
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004334_19 | MGYG000004334_19_9 | 14985 | 16031 | - | 9.B.18.2.1 |
| TC | MGYG000004334_19 | MGYG000004334_19_10 | 16056 | 17339 | - | 2.A.66.2.10 |
| TC | MGYG000004334_19 | MGYG000004334_19_11 | 17390 | 18136 | - | 8.A.3.2.1 |
| TC | MGYG000004334_19 | MGYG000004334_19_12 | 18111 | 18899 | - | 8.A.3.2.4 |
| CAZyme | MGYG000004334_19 | MGYG000004334_19_13 | 19061 | 20266 | - | GT4 |
| CAZyme | MGYG000004334_19 | MGYG000004334_19_14 | 20263 | 21477 | - | GT4 |
| TC | MGYG000004334_19 | MGYG000004334_19_15 | 21595 | 22248 | - | 9.B.18.1.2 |
| peptidase | MGYG000004334_19 | MGYG000004334_19_16 | 22603 | 23475 | + | M24.UPA |
| TC | MGYG000004334_19 | MGYG000004334_19_17 | 23513 | 26152 | - | 3.A.1.32.2 |
| TC | MGYG000004334_19 | MGYG000004334_19_18 | 26125 | 27015 | - | 3.A.1.32.2 |
Gene ID: MGYG000004334_19_9
Type: TC
Location: 14985 - 16031 (-)
Type: TC
Location: 14985 - 16031 (-)
Gene ID: MGYG000004334_19_10
Type: TC
Location: 16056 - 17339 (-)
Type: TC
Location: 16056 - 17339 (-)
Gene ID: MGYG000004334_19_11
Type: TC
Location: 17390 - 18136 (-)
Type: TC
Location: 17390 - 18136 (-)
Gene ID: MGYG000004334_19_12
Type: TC
Location: 18111 - 18899 (-)
Type: TC
Location: 18111 - 18899 (-)
Gene ID: MGYG000004334_19_13
Type: CAZyme
Location: 19061 - 20266 (-)
Type: CAZyme
Location: 19061 - 20266 (-)
Gene ID: MGYG000004334_19_14
Type: CAZyme
Location: 20263 - 21477 (-)
Type: CAZyme
Location: 20263 - 21477 (-)
Gene ID: MGYG000004334_19_15
Type: TC
Location: 21595 - 22248 (-)
Type: TC
Location: 21595 - 22248 (-)
Gene ID: MGYG000004334_19_16
Type: peptidase
Location: 22603 - 23475 (+)
Type: peptidase
Location: 22603 - 23475 (+)
Gene ID: MGYG000004334_19_17
Type: TC
Location: 23513 - 26152 (-)
Type: TC
Location: 23513 - 26152 (-)
Gene ID: MGYG000004334_19_18
Type: TC
Location: 26125 - 27015 (-)
Type: TC
Location: 26125 - 27015 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp002493635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.