Cluster: MGYG000004328_CGC8
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004328
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004328_3 | MGYG000004328_3_69 | 68575 | 70914 | - | 3.A.3.5.15 |
| STP | MGYG000004328_3 | MGYG000004328_3_70 | 71588 | 73672 | - | Pkinase |
| STP | MGYG000004328_3 | MGYG000004328_3_71 | 73844 | 74806 | - | FHA |
| TC | MGYG000004328_3 | MGYG000004328_3_72 | 75314 | 77572 | + | 1.I.1.1.3 |
| STP | MGYG000004328_3 | MGYG000004328_3_73 | 78194 | 78955 | + | Fer4 |
| TC | MGYG000004328_3 | MGYG000004328_3_74 | 79299 | 79811 | + | 4.A.1.2.5 |
| pfam | MGYG000004328_3 | MGYG000004328_3_75 | 79818 | 80684 | + | PRD | PRD | CAT_RBD |
| TC | MGYG000004328_3 | MGYG000004328_3_76 | 80784 | 82400 | + | 4.A.1.1.3 |
| CAZyme | MGYG000004328_3 | MGYG000004328_3_77 | 82404 | 83786 | + | GH4 |
Gene ID: MGYG000004328_3_69
Type: TC
Location: 68575 - 70914 (-)
Type: TC
Location: 68575 - 70914 (-)
Gene ID: MGYG000004328_3_70
Type: STP
Location: 71588 - 73672 (-)
Type: STP
Location: 71588 - 73672 (-)
Gene ID: MGYG000004328_3_71
Type: STP
Location: 73844 - 74806 (-)
Type: STP
Location: 73844 - 74806 (-)
Gene ID: MGYG000004328_3_72
Type: TC
Location: 75314 - 77572 (+)
Type: TC
Location: 75314 - 77572 (+)
Gene ID: MGYG000004328_3_73
Type: STP
Location: 78194 - 78955 (+)
Type: STP
Location: 78194 - 78955 (+)
Gene ID: MGYG000004328_3_74
Type: TC
Location: 79299 - 79811 (+)
Type: TC
Location: 79299 - 79811 (+)
Gene ID: MGYG000004328_3_75
Type: pfam
Location: 79818 - 80684 (+)
Type: pfam
Location: 79818 - 80684 (+)
Gene ID: MGYG000004328_3_76
Type: TC
Location: 80784 - 82400 (+)
Type: TC
Location: 80784 - 82400 (+)
Gene ID: MGYG000004328_3_77
Type: CAZyme
Location: 82404 - 83786 (+)
Type: CAZyme
Location: 82404 - 83786 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp958421275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.