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Cluster: MGYG000004328_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004328_25 MGYG000004328_25_1 57 1226 - CE9
STP MGYG000004328_25 MGYG000004328_25_2 1346 2512 - SIS | SIS
TF MGYG000004328_25 MGYG000004328_25_3 2627 3358 - GntR
TC MGYG000004328_25 MGYG000004328_25_4 3544 4626 - 4.A.6.1.4
TC MGYG000004328_25 MGYG000004328_25_5 4616 5416 - 4.A.6.1.4
TC MGYG000004328_25 MGYG000004328_25_6 5507 5989 - 4.A.6.1.4
pfam MGYG000004328_25 MGYG000004328_25_7 6026 6307 - YajC
TC MGYG000004328_25 MGYG000004328_25_8 6307 6750 - 4.A.6.1.16
Gene ID: MGYG000004328_25_1
Type: CAZyme
Location: 57 - 1226 (-)
Gene ID: MGYG000004328_25_2
Type: STP
Location: 1346 - 2512 (-)
Gene ID: MGYG000004328_25_3
Type: TF
Location: 2627 - 3358 (-)
Gene ID: MGYG000004328_25_4
Type: TC
Location: 3544 - 4626 (-)
Gene ID: MGYG000004328_25_5
Type: TC
Location: 4616 - 5416 (-)
Gene ID: MGYG000004328_25_6
Type: TC
Location: 5507 - 5989 (-)
Gene ID: MGYG000004328_25_7
Type: pfam
Location: 6026 - 6307 (-)
Gene ID: MGYG000004328_25_8
Type: TC
Location: 6307 - 6750 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004328_25_7 vegan > omnivore 1.00781 0.00863

🧭 Explore Read Mapping of CGC

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