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Cluster: MGYG000004316_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004316_54 MGYG000004316_54_3 1907 4108 - GH25
pfam MGYG000004316_54 MGYG000004316_54_4 4289 5956 - Amidase_3 | Choline_bind_2 | Choline_bind_2 | Choline_bind_3
pfam MGYG000004316_54 MGYG000004316_54_5 6115 7140 - Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_2 | Choline_bind_2 | Choline_bind_3
TC MGYG000004316_54 MGYG000004316_54_6 7340 8236 + 2.A.7.3.12
TC MGYG000004316_54 MGYG000004316_54_7 8405 9046 + 3.A.1.3.15
TC MGYG000004316_54 MGYG000004316_54_8 9059 9688 + 3.A.1.3.2
TC MGYG000004316_54 MGYG000004316_54_9 9698 10546 + 3.A.1.3.12
Gene ID: MGYG000004316_54_3
Type: CAZyme
Location: 1907 - 4108 (-)
Gene ID: MGYG000004316_54_4
Type: pfam
Location: 4289 - 5956 (-)
Gene ID: MGYG000004316_54_5
Type: pfam
Location: 6115 - 7140 (-)
Gene ID: MGYG000004316_54_6
Type: TC
Location: 7340 - 8236 (+)
Gene ID: MGYG000004316_54_7
Type: TC
Location: 8405 - 9046 (+)
Gene ID: MGYG000004316_54_8
Type: TC
Location: 9059 - 9688 (+)
Gene ID: MGYG000004316_54_9
Type: TC
Location: 9698 - 10546 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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