Cluster: MGYG000004313_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004313
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004313_2 | MGYG000004313_2_236 | 259667 | 260587 | + | 2.A.4.7.1 |
| pfam | MGYG000004313_2 | MGYG000004313_2_237 | 260650 | 261615 | + | PFK |
| TC | MGYG000004313_2 | MGYG000004313_2_238 | 261694 | 264708 | - | 1.B.14.1.14 |
| pfam | MGYG000004313_2 | MGYG000004313_2_239 | 264939 | 266114 | - | UPF0020 | MTS | tRNA_U5-meth_tr | Methyltransf_31 |
| CAZyme | MGYG000004313_2 | MGYG000004313_2_240 | 266116 | 267162 | - | GH3 |
| pfam | MGYG000004313_2 | MGYG000004313_2_241 | 267164 | 267517 | - | DUF1425 | LPAM_1 |
| pfam | MGYG000004313_2 | MGYG000004313_2_242 | 267517 | 267867 | - | HIT | DcpS_C |
| TC | MGYG000004313_2 | MGYG000004313_2_243 | 268177 | 269028 | + | 1.A.16.1.1 |
| pfam | MGYG000004313_2 | MGYG000004313_2_244 | 269115 | 271427 | + | Gly_radical | PFL-like |
| pfam | MGYG000004313_2 | MGYG000004313_2_245 | 271592 | 272332 | + | Radical_SAM | Fer4_12 |
| TC | MGYG000004313_2 | MGYG000004313_2_246 | 272475 | 273338 | + | 2.A.7.3.13 |
| TC | MGYG000004313_2 | MGYG000004313_2_247 | 273420 | 274832 | - | 1.B.76.1.8 |
Gene ID: MGYG000004313_2_236
Type: TC
Location: 259667 - 260587 (+)
Type: TC
Location: 259667 - 260587 (+)
Gene ID: MGYG000004313_2_237
Type: pfam
Location: 260650 - 261615 (+)
Type: pfam
Location: 260650 - 261615 (+)
Gene ID: MGYG000004313_2_238
Type: TC
Location: 261694 - 264708 (-)
Type: TC
Location: 261694 - 264708 (-)
Gene ID: MGYG000004313_2_239
Type: pfam
Location: 264939 - 266114 (-)
Type: pfam
Location: 264939 - 266114 (-)
Gene ID: MGYG000004313_2_240
Type: CAZyme
Location: 266116 - 267162 (-)
Type: CAZyme
Location: 266116 - 267162 (-)
Gene ID: MGYG000004313_2_241
Type: pfam
Location: 267164 - 267517 (-)
Type: pfam
Location: 267164 - 267517 (-)
Gene ID: MGYG000004313_2_242
Type: pfam
Location: 267517 - 267867 (-)
Type: pfam
Location: 267517 - 267867 (-)
Gene ID: MGYG000004313_2_243
Type: TC
Location: 268177 - 269028 (+)
Type: TC
Location: 268177 - 269028 (+)
Gene ID: MGYG000004313_2_244
Type: pfam
Location: 269115 - 271427 (+)
Type: pfam
Location: 269115 - 271427 (+)
Gene ID: MGYG000004313_2_245
Type: pfam
Location: 271592 - 272332 (+)
Type: pfam
Location: 271592 - 272332 (+)
Gene ID: MGYG000004313_2_246
Type: TC
Location: 272475 - 273338 (+)
Type: TC
Location: 272475 - 273338 (+)
Gene ID: MGYG000004313_2_247
Type: TC
Location: 273420 - 274832 (-)
Type: TC
Location: 273420 - 274832 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Aggregatibacter
Species
Aggregatibacter segnis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.