Cluster: MGYG000004313_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004313
- CGC Family ID: CGCFAM_01473
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004313_1 | MGYG000004313_1_429 | 482430 | 484889 | - | GT35 |
| CAZyme | MGYG000004313_1 | MGYG000004313_1_430 | 485007 | 486446 | - | GT5 |
| pfam | MGYG000004313_1 | MGYG000004313_1_431 | 486700 | 487998 | - | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| CAZyme | MGYG000004313_1 | MGYG000004313_1_432 | 488020 | 490035 | - | GH13_11 |
| CAZyme | MGYG000004313_1 | MGYG000004313_1_433 | 490039 | 492228 | - | CBM48 | GH13_9 |
| CAZyme | MGYG000004313_1 | MGYG000004313_1_434 | 492241 | 494334 | - | GH77 |
| pfam | MGYG000004313_1 | MGYG000004313_1_435 | 494579 | 495022 | - | CxxCxxCC |
| peptidase | MGYG000004313_1 | MGYG000004313_1_436 | 495196 | 496458 | - | M38.UNW |
| TC | MGYG000004313_1 | MGYG000004313_1_437 | 496468 | 497694 | - | 2.A.39.1.1 |
| pfam | MGYG000004313_1 | MGYG000004313_1_438 | 497853 | 498557 | - | DUF6882 |
| TC | MGYG000004313_1 | MGYG000004313_1_439 | 498844 | 499512 | + | 1.B.48.1.5 |
Gene ID: MGYG000004313_1_429
Type: CAZyme
Location: 482430 - 484889 (-)
Type: CAZyme
Location: 482430 - 484889 (-)
Gene ID: MGYG000004313_1_430
Type: CAZyme
Location: 485007 - 486446 (-)
Type: CAZyme
Location: 485007 - 486446 (-)
Gene ID: MGYG000004313_1_431
Type: pfam
Location: 486700 - 487998 (-)
Type: pfam
Location: 486700 - 487998 (-)
Gene ID: MGYG000004313_1_432
Type: CAZyme
Location: 488020 - 490035 (-)
Type: CAZyme
Location: 488020 - 490035 (-)
Gene ID: MGYG000004313_1_433
Type: CAZyme
Location: 490039 - 492228 (-)
Type: CAZyme
Location: 490039 - 492228 (-)
Gene ID: MGYG000004313_1_434
Type: CAZyme
Location: 492241 - 494334 (-)
Type: CAZyme
Location: 492241 - 494334 (-)
Gene ID: MGYG000004313_1_435
Type: pfam
Location: 494579 - 495022 (-)
Type: pfam
Location: 494579 - 495022 (-)
Gene ID: MGYG000004313_1_436
Type: peptidase
Location: 495196 - 496458 (-)
Type: peptidase
Location: 495196 - 496458 (-)
Gene ID: MGYG000004313_1_437
Type: TC
Location: 496468 - 497694 (-)
Type: TC
Location: 496468 - 497694 (-)
Gene ID: MGYG000004313_1_438
Type: pfam
Location: 497853 - 498557 (-)
Type: pfam
Location: 497853 - 498557 (-)
Gene ID: MGYG000004313_1_439
Type: TC
Location: 498844 - 499512 (+)
Type: TC
Location: 498844 - 499512 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Aggregatibacter
Species
Aggregatibacter segnis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.