Cluster: MGYG000004313_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004313
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004313_4 | MGYG000004313_4_97 | 98521 | 99081 | - | 9.A.4.1.2 |
| TC | MGYG000004313_4 | MGYG000004313_4_98 | 99097 | 100044 | - | 1.A.35.1.1 |
| pfam | MGYG000004313_4 | MGYG000004313_4_99 | 100474 | 101274 | - | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | MGYG000004313_4 | MGYG000004313_4_100 | 101422 | 104520 | - | 2.A.6.2.36 |
| TC | MGYG000004313_4 | MGYG000004313_4_101 | 104534 | 105724 | - | 2.A.6.2.28 |
| STP | MGYG000004313_4 | MGYG000004313_4_102 | 105752 | 106327 | - | TetR_N |
| pfam | MGYG000004313_4 | MGYG000004313_4_103 | 106521 | 107342 | - | SPOR |
| TC | MGYG000004313_4 | MGYG000004313_4_104 | 107449 | 109647 | - | 3.A.11.3.1 |
| CAZyme | MGYG000004313_4 | MGYG000004313_4_105 | 109809 | 110699 | + | GT8 |
| CAZyme | MGYG000004313_4 | MGYG000004313_4_106 | 110727 | 111389 | - | GT25 |
| pfam | MGYG000004313_4 | MGYG000004313_4_107 | 111843 | 112055 | + | Ribosomal_L31 |
| CAZyme | MGYG000004313_4 | MGYG000004313_4_108 | 112117 | 112803 | + | GT25 |
| CAZyme | MGYG000004313_4 | MGYG000004313_4_109 | 112800 | 113831 | + | GT9 |
Gene ID: MGYG000004313_4_97
Type: TC
Location: 98521 - 99081 (-)
Type: TC
Location: 98521 - 99081 (-)
Gene ID: MGYG000004313_4_98
Type: TC
Location: 99097 - 100044 (-)
Type: TC
Location: 99097 - 100044 (-)
Gene ID: MGYG000004313_4_99
Type: pfam
Location: 100474 - 101274 (-)
Type: pfam
Location: 100474 - 101274 (-)
Gene ID: MGYG000004313_4_100
Type: TC
Location: 101422 - 104520 (-)
Type: TC
Location: 101422 - 104520 (-)
Gene ID: MGYG000004313_4_101
Type: TC
Location: 104534 - 105724 (-)
Type: TC
Location: 104534 - 105724 (-)
Gene ID: MGYG000004313_4_102
Type: STP
Location: 105752 - 106327 (-)
Type: STP
Location: 105752 - 106327 (-)
Gene ID: MGYG000004313_4_103
Type: pfam
Location: 106521 - 107342 (-)
Type: pfam
Location: 106521 - 107342 (-)
Gene ID: MGYG000004313_4_104
Type: TC
Location: 107449 - 109647 (-)
Type: TC
Location: 107449 - 109647 (-)
Gene ID: MGYG000004313_4_105
Type: CAZyme
Location: 109809 - 110699 (+)
Type: CAZyme
Location: 109809 - 110699 (+)
Gene ID: MGYG000004313_4_106
Type: CAZyme
Location: 110727 - 111389 (-)
Type: CAZyme
Location: 110727 - 111389 (-)
Gene ID: MGYG000004313_4_107
Type: pfam
Location: 111843 - 112055 (+)
Type: pfam
Location: 111843 - 112055 (+)
Gene ID: MGYG000004313_4_108
Type: CAZyme
Location: 112117 - 112803 (+)
Type: CAZyme
Location: 112117 - 112803 (+)
Gene ID: MGYG000004313_4_109
Type: CAZyme
Location: 112800 - 113831 (+)
Type: CAZyme
Location: 112800 - 113831 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Aggregatibacter
Species
Aggregatibacter segnis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.