Cluster: MGYG000004297_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004297
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004297_7 | MGYG000004297_7_42 | 43978 | 45441 | + | 2.A.3.2.3 |
| NULL(UNKNOWN) | MGYG000004297_7 | MGYG000004297_7_43 | 45456 | 46073 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004297_7 | MGYG000004297_7_44 | 46078 | 48438 | + | 9.A.8.1.6 |
| TC | MGYG000004297_7 | MGYG000004297_7_45 | 48559 | 49755 | + | 2.A.1.2.18 |
| CAZyme | MGYG000004297_7 | MGYG000004297_7_46 | 49909 | 51285 | + | GH13_20 |
Gene ID: MGYG000004297_7_42
Type: TC
Location: 43978 - 45441 (+)
Type: TC
Location: 43978 - 45441 (+)
Gene ID: MGYG000004297_7_43
Type:
Location: 45456 - 46073 (-)
Type:
Location: 45456 - 46073 (-)
Gene ID: MGYG000004297_7_44
Type: TC
Location: 46078 - 48438 (+)
Type: TC
Location: 46078 - 48438 (+)
Gene ID: MGYG000004297_7_45
Type: TC
Location: 48559 - 49755 (+)
Type: TC
Location: 48559 - 49755 (+)
Gene ID: MGYG000004297_7_46
Type: CAZyme
Location: 49909 - 51285 (+)
Type: CAZyme
Location: 49909 - 51285 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902493895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004297_7_42 | vegan > omnivore | 1.42706 | 0.01057 |