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Cluster: MGYG000004292_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004292_8 MGYG000004292_8_1 371 1852 + 3.A.1.121.3
CAZyme MGYG000004292_8 MGYG000004292_8_2 1940 3505 - GH3
STP MGYG000004292_8 MGYG000004292_8_3 3574 4701 + Aminotran_1_2
pfam MGYG000004292_8 MGYG000004292_8_4 4714 5349 + PglD_N
TC MGYG000004292_8 MGYG000004292_8_5 5366 6019 + 9.B.18.1.2
CAZyme MGYG000004292_8 MGYG000004292_8_6 6012 6698 + CE14
pfam MGYG000004292_8 MGYG000004292_8_7 6698 7390 + WbqC
NULL(UNKNOWN) MGYG000004292_8 MGYG000004292_8_8 7392 8375 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000004292_8 MGYG000004292_8_9 8365 9537 + GT4
pfam MGYG000004292_8 MGYG000004292_8_10 9530 10336 + HpcH_HpaI
CAZyme MGYG000004292_8 MGYG000004292_8_11 10437 11255 + GT2
pfam MGYG000004292_8 MGYG000004292_8_12 11257 12453 + Glycos_transf_1 | Glyco_trans_1_4
NULL(UNKNOWN) MGYG000004292_8 MGYG000004292_8_13 12498 13766 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000004292_8 MGYG000004292_8_14 13763 15025 + GT4
CAZyme MGYG000004292_8 MGYG000004292_8_15 15022 16077 + GT4
pfam MGYG000004292_8 MGYG000004292_8_16 16102 17607 + Polysacc_synt
CAZyme MGYG000004292_8 MGYG000004292_8_17 17604 18533 + GT2
pfam MGYG000004292_8 MGYG000004292_8_18 18559 19773 + PS_pyruv_trans
pfam MGYG000004292_8 MGYG000004292_8_19 19770 20996 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC MGYG000004292_8 MGYG000004292_8_20 21208 22251 + 9.B.18.2.1
Gene ID: MGYG000004292_8_1
Type: TC
Location: 371 - 1852 (+)
Gene ID: MGYG000004292_8_2
Type: CAZyme
Location: 1940 - 3505 (-)
Gene ID: MGYG000004292_8_3
Type: STP
Location: 3574 - 4701 (+)
Gene ID: MGYG000004292_8_4
Type: pfam
Location: 4714 - 5349 (+)
Gene ID: MGYG000004292_8_5
Type: TC
Location: 5366 - 6019 (+)
Gene ID: MGYG000004292_8_6
Type: CAZyme
Location: 6012 - 6698 (+)
Gene ID: MGYG000004292_8_7
Type: pfam
Location: 6698 - 7390 (+)
Gene ID: MGYG000004292_8_8
Type:
Location: 7392 - 8375 (+)
Gene ID: MGYG000004292_8_9
Type: CAZyme
Location: 8365 - 9537 (+)
Gene ID: MGYG000004292_8_10
Type: pfam
Location: 9530 - 10336 (+)
Gene ID: MGYG000004292_8_11
Type: CAZyme
Location: 10437 - 11255 (+)
Gene ID: MGYG000004292_8_12
Type: pfam
Location: 11257 - 12453 (+)
Gene ID: MGYG000004292_8_13
Type:
Location: 12498 - 13766 (+)
Gene ID: MGYG000004292_8_14
Type: CAZyme
Location: 13763 - 15025 (+)
Gene ID: MGYG000004292_8_15
Type: CAZyme
Location: 15022 - 16077 (+)
Gene ID: MGYG000004292_8_16
Type: pfam
Location: 16102 - 17607 (+)
Gene ID: MGYG000004292_8_17
Type: CAZyme
Location: 17604 - 18533 (+)
Gene ID: MGYG000004292_8_18
Type: pfam
Location: 18559 - 19773 (+)
Gene ID: MGYG000004292_8_19
Type: pfam
Location: 19770 - 20996 (+)
Gene ID: MGYG000004292_8_20
Type: TC
Location: 21208 - 22251 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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