Cluster: MGYG000004286_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004286
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004286_2 | MGYG000004286_2_87 | 90302 | 90484 | - | 9.B.97.6.3 |
| TC | MGYG000004286_2 | MGYG000004286_2_88 | 90691 | 91458 | - | 3.A.1.103.1 |
| TC | MGYG000004286_2 | MGYG000004286_2_89 | 91470 | 92315 | - | 3.A.1.103.6 |
| pfam | MGYG000004286_2 | MGYG000004286_2_90 | 92405 | 94069 | - | DUF6020 |
| CAZyme | MGYG000004286_2 | MGYG000004286_2_91 | 94338 | 95309 | + | GT81 |
| CAZyme | MGYG000004286_2 | MGYG000004286_2_92 | 95316 | 96194 | + | GT2 |
| TC | MGYG000004286_2 | MGYG000004286_2_93 | 96269 | 98680 | + | 9.B.144.1.5 |
Gene ID: MGYG000004286_2_87
Type: TC
Location: 90302 - 90484 (-)
Type: TC
Location: 90302 - 90484 (-)
Gene ID: MGYG000004286_2_88
Type: TC
Location: 90691 - 91458 (-)
Type: TC
Location: 90691 - 91458 (-)
Gene ID: MGYG000004286_2_89
Type: TC
Location: 91470 - 92315 (-)
Type: TC
Location: 91470 - 92315 (-)
Gene ID: MGYG000004286_2_90
Type: pfam
Location: 92405 - 94069 (-)
Type: pfam
Location: 92405 - 94069 (-)
Gene ID: MGYG000004286_2_91
Type: CAZyme
Location: 94338 - 95309 (+)
Type: CAZyme
Location: 94338 - 95309 (+)
Gene ID: MGYG000004286_2_92
Type: CAZyme
Location: 95316 - 96194 (+)
Type: CAZyme
Location: 95316 - 96194 (+)
Gene ID: MGYG000004286_2_93
Type: TC
Location: 96269 - 98680 (+)
Type: TC
Location: 96269 - 98680 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902406375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.