Cluster: MGYG000004283_CGC4
🧬 Cluster Details
- Gene Count: 23
- CAZyme Count: 14
- Substrate:
- Genome ID: MGYG000004283
- CGC Family ID: CGCFAM_01855
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004283_2 | MGYG000004283_2_251 | 236995 | 237900 | - | 2.A.69.4.3 |
| pfam | MGYG000004283_2 | MGYG000004283_2_252 | 238000 | 238935 | - | RecA | ATPase | Rad51 | AAA_25 | HHH_5 |
| pfam | MGYG000004283_2 | MGYG000004283_2_253 | 238962 | 241349 | - | tRNA_anti-codon |
| TC | MGYG000004283_2 | MGYG000004283_2_254 | 241535 | 242938 | - | 9.B.18.1.1 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_255 | 242999 | 243856 | - | GT2 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_256 | 243863 | 244837 | - | GT2 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_257 | 244834 | 245796 | - | GT2 |
| pfam | MGYG000004283_2 | MGYG000004283_2_258 | 245799 | 246884 | - | Glyphos_transf |
| TC | MGYG000004283_2 | MGYG000004283_2_259 | 246893 | 248632 | - | 3.A.1.103.1 |
| TC | MGYG000004283_2 | MGYG000004283_2_260 | 248656 | 249441 | - | 3.A.1.103.6 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_261 | 249513 | 250550 | - | GT2 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_262 | 250554 | 251618 | - | GT2 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_263 | 251611 | 253212 | - | GT4 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_264 | 253203 | 254816 | - | GT2 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_265 | 254827 | 255849 | - | GT116 |
| NULL(UNKNOWN) | MGYG000004283_2 | MGYG000004283_2_266 | 256012 | 256299 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000004283_2 | MGYG000004283_2_267 | 256306 | 256623 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_268 | 256760 | 258310 | - | GT4 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_269 | 258373 | 259488 | + | GT2 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_270 | 259478 | 262051 | - | GT116 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_271 | 262056 | 263702 | - | GT2 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_272 | 263686 | 265125 | - | GT2 |
| CAZyme | MGYG000004283_2 | MGYG000004283_2_273 | 265133 | 266272 | - | GT2 |
Gene ID: MGYG000004283_2_251
Type: TC
Location: 236995 - 237900 (-)
Type: TC
Location: 236995 - 237900 (-)
Gene ID: MGYG000004283_2_252
Type: pfam
Location: 238000 - 238935 (-)
Type: pfam
Location: 238000 - 238935 (-)
Gene ID: MGYG000004283_2_253
Type: pfam
Location: 238962 - 241349 (-)
Type: pfam
Location: 238962 - 241349 (-)
Gene ID: MGYG000004283_2_254
Type: TC
Location: 241535 - 242938 (-)
Type: TC
Location: 241535 - 242938 (-)
Gene ID: MGYG000004283_2_255
Type: CAZyme
Location: 242999 - 243856 (-)
Type: CAZyme
Location: 242999 - 243856 (-)
Gene ID: MGYG000004283_2_256
Type: CAZyme
Location: 243863 - 244837 (-)
Type: CAZyme
Location: 243863 - 244837 (-)
Gene ID: MGYG000004283_2_257
Type: CAZyme
Location: 244834 - 245796 (-)
Type: CAZyme
Location: 244834 - 245796 (-)
Gene ID: MGYG000004283_2_258
Type: pfam
Location: 245799 - 246884 (-)
Type: pfam
Location: 245799 - 246884 (-)
Gene ID: MGYG000004283_2_259
Type: TC
Location: 246893 - 248632 (-)
Type: TC
Location: 246893 - 248632 (-)
Gene ID: MGYG000004283_2_260
Type: TC
Location: 248656 - 249441 (-)
Type: TC
Location: 248656 - 249441 (-)
Gene ID: MGYG000004283_2_261
Type: CAZyme
Location: 249513 - 250550 (-)
Type: CAZyme
Location: 249513 - 250550 (-)
Gene ID: MGYG000004283_2_262
Type: CAZyme
Location: 250554 - 251618 (-)
Type: CAZyme
Location: 250554 - 251618 (-)
Gene ID: MGYG000004283_2_263
Type: CAZyme
Location: 251611 - 253212 (-)
Type: CAZyme
Location: 251611 - 253212 (-)
Gene ID: MGYG000004283_2_264
Type: CAZyme
Location: 253203 - 254816 (-)
Type: CAZyme
Location: 253203 - 254816 (-)
Gene ID: MGYG000004283_2_265
Type: CAZyme
Location: 254827 - 255849 (-)
Type: CAZyme
Location: 254827 - 255849 (-)
Gene ID: MGYG000004283_2_266
Type:
Location: 256012 - 256299 (-)
Type:
Location: 256012 - 256299 (-)
Gene ID: MGYG000004283_2_267
Type:
Location: 256306 - 256623 (-)
Type:
Location: 256306 - 256623 (-)
Gene ID: MGYG000004283_2_268
Type: CAZyme
Location: 256760 - 258310 (-)
Type: CAZyme
Location: 256760 - 258310 (-)
Gene ID: MGYG000004283_2_269
Type: CAZyme
Location: 258373 - 259488 (+)
Type: CAZyme
Location: 258373 - 259488 (+)
Gene ID: MGYG000004283_2_270
Type: CAZyme
Location: 259478 - 262051 (-)
Type: CAZyme
Location: 259478 - 262051 (-)
Gene ID: MGYG000004283_2_271
Type: CAZyme
Location: 262056 - 263702 (-)
Type: CAZyme
Location: 262056 - 263702 (-)
Gene ID: MGYG000004283_2_272
Type: CAZyme
Location: 263686 - 265125 (-)
Type: CAZyme
Location: 263686 - 265125 (-)
Gene ID: MGYG000004283_2_273
Type: CAZyme
Location: 265133 - 266272 (-)
Type: CAZyme
Location: 265133 - 266272 (-)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Genus
Methanobrevibacter_A
Species
Methanobrevibacter_A woesei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.