Cluster: MGYG000004281_CGC68
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000004281
- CGC Family ID: CGCFAM_02014
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004281_51 | MGYG000004281_51_1 | 95 | 2443 | + | GH20 |
| CAZyme | MGYG000004281_51 | MGYG000004281_51_2 | 2587 | 4983 | - | GH51_2 |
| STP | MGYG000004281_51 | MGYG000004281_51_3 | 5130 | 5516 | + | Response_reg |
| STP | MGYG000004281_51 | MGYG000004281_51_4 | 5613 | 6731 | + | HATPase_c | HisKA | Response_reg |
| CAZyme | MGYG000004281_51 | MGYG000004281_51_5 | 6806 | 7564 | - | GT2 |
| pfam | MGYG000004281_51 | MGYG000004281_51_6 | 7652 | 11026 | + | DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter |
| TC | MGYG000004281_51 | MGYG000004281_51_7 | 11188 | 13092 | + | 4.C.1.1.14 |
| CAZyme | MGYG000004281_51 | MGYG000004281_51_8 | 13150 | 15753 | + | GH2 |
| STP | MGYG000004281_51 | MGYG000004281_51_9 | 15852 | 18233 | - | HATPase_c | HisKA | Response_reg | Response_reg |
| NULL(UNKNOWN) | MGYG000004281_51 | MGYG000004281_51_10 | 18257 | 18760 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004281_51 | MGYG000004281_51_11 | 18896 | 20446 | - | 2.A.50.2.1 |
Gene ID: MGYG000004281_51_1
Type: CAZyme
Location: 95 - 2443 (+)
Type: CAZyme
Location: 95 - 2443 (+)
Gene ID: MGYG000004281_51_2
Type: CAZyme
Location: 2587 - 4983 (-)
Type: CAZyme
Location: 2587 - 4983 (-)
Gene ID: MGYG000004281_51_3
Type: STP
Location: 5130 - 5516 (+)
Type: STP
Location: 5130 - 5516 (+)
Gene ID: MGYG000004281_51_4
Type: STP
Location: 5613 - 6731 (+)
Type: STP
Location: 5613 - 6731 (+)
Gene ID: MGYG000004281_51_5
Type: CAZyme
Location: 6806 - 7564 (-)
Type: CAZyme
Location: 6806 - 7564 (-)
Gene ID: MGYG000004281_51_6
Type: pfam
Location: 7652 - 11026 (+)
Type: pfam
Location: 7652 - 11026 (+)
Gene ID: MGYG000004281_51_7
Type: TC
Location: 11188 - 13092 (+)
Type: TC
Location: 11188 - 13092 (+)
Gene ID: MGYG000004281_51_8
Type: CAZyme
Location: 13150 - 15753 (+)
Type: CAZyme
Location: 13150 - 15753 (+)
Gene ID: MGYG000004281_51_9
Type: STP
Location: 15852 - 18233 (-)
Type: STP
Location: 15852 - 18233 (-)
Gene ID: MGYG000004281_51_10
Type:
Location: 18257 - 18760 (-)
Type:
Location: 18257 - 18760 (-)
Gene ID: MGYG000004281_51_11
Type: TC
Location: 18896 - 20446 (-)
Type: TC
Location: 18896 - 20446 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp900552465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004281_51_4 | vegetarian > omnivore | 1.04480 | 0.00050 |