Cluster: MGYG000004281_CGC5
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate: galactan/pectin/host glycan
- Genome ID: MGYG000004281
- CGC Family ID: CGCFAM_00485
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004281_1 | MGYG000004281_1_162 | 202939 | 203913 | - | GH23 |
| pfam | MGYG000004281_1 | MGYG000004281_1_163 | 203891 | 205264 | - | CHU_C |
| NULL(UNKNOWN) | MGYG000004281_1 | MGYG000004281_1_164 | 205334 | 205822 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004281_1 | MGYG000004281_1_165 | 206928 | 209219 | - | GH92 |
| CAZyme | MGYG000004281_1 | MGYG000004281_1_166 | 209223 | 211532 | - | GH92 |
| pfam | MGYG000004281_1 | MGYG000004281_1_167 | 211743 | 213311 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004281_1 | MGYG000004281_1_168 | 213336 | 216695 | - | 1.B.14.6.1 |
| STP | MGYG000004281_1 | MGYG000004281_1_169 | 216846 | 217823 | - | FecR |
| TF | MGYG000004281_1 | MGYG000004281_1_170 | 217893 | 218432 | - | GerE |
| TC | MGYG000004281_1 | MGYG000004281_1_171 | 218559 | 219857 | + | 2.A.23.1.1 |
Gene ID: MGYG000004281_1_162
Type: CAZyme
Location: 202939 - 203913 (-)
Type: CAZyme
Location: 202939 - 203913 (-)
Gene ID: MGYG000004281_1_163
Type: pfam
Location: 203891 - 205264 (-)
Type: pfam
Location: 203891 - 205264 (-)
Gene ID: MGYG000004281_1_164
Type:
Location: 205334 - 205822 (-)
Type:
Location: 205334 - 205822 (-)
Gene ID: MGYG000004281_1_165
Type: CAZyme
Location: 206928 - 209219 (-)
Type: CAZyme
Location: 206928 - 209219 (-)
Gene ID: MGYG000004281_1_166
Type: CAZyme
Location: 209223 - 211532 (-)
Type: CAZyme
Location: 209223 - 211532 (-)
Gene ID: MGYG000004281_1_167
Type: pfam
Location: 211743 - 213311 (-)
Type: pfam
Location: 211743 - 213311 (-)
Gene ID: MGYG000004281_1_168
Type: TC
Location: 213336 - 216695 (-)
Type: TC
Location: 213336 - 216695 (-)
Gene ID: MGYG000004281_1_169
Type: STP
Location: 216846 - 217823 (-)
Type: STP
Location: 216846 - 217823 (-)
Gene ID: MGYG000004281_1_170
Type: TF
Location: 217893 - 218432 (-)
Type: TF
Location: 217893 - 218432 (-)
Gene ID: MGYG000004281_1_171
Type: TC
Location: 218559 - 219857 (+)
Type: TC
Location: 218559 - 219857 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp900552465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004281_1_162 | vegetarian > vegan | 1.10303 | 0.01733 |