Cluster: MGYG000004281_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin/host glycan
- Genome ID: MGYG000004281
- CGC Family ID: CGCFAM_00110
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004281_11 | MGYG000004281_11_30 | 43231 | 46521 | + | 1.B.14.6.1 |
| pfam | MGYG000004281_11 | MGYG000004281_11_31 | 46535 | 48094 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000004281_11 | MGYG000004281_11_32 | 48234 | 50285 | + | GH20 |
| CAZyme | MGYG000004281_11 | MGYG000004281_11_33 | 50321 | 52981 | + | GH2 |
| pfam | MGYG000004281_11 | MGYG000004281_11_34 | 53115 | 54263 | + | DUF5128 |
| CAZyme | MGYG000004281_11 | MGYG000004281_11_35 | 54271 | 55059 | + | GH16_3 |
Gene ID: MGYG000004281_11_30
Type: TC
Location: 43231 - 46521 (+)
Type: TC
Location: 43231 - 46521 (+)
Gene ID: MGYG000004281_11_31
Type: pfam
Location: 46535 - 48094 (+)
Type: pfam
Location: 46535 - 48094 (+)
Gene ID: MGYG000004281_11_32
Type: CAZyme
Location: 48234 - 50285 (+)
Type: CAZyme
Location: 48234 - 50285 (+)
Gene ID: MGYG000004281_11_33
Type: CAZyme
Location: 50321 - 52981 (+)
Type: CAZyme
Location: 50321 - 52981 (+)
Gene ID: MGYG000004281_11_34
Type: pfam
Location: 53115 - 54263 (+)
Type: pfam
Location: 53115 - 54263 (+)
Gene ID: MGYG000004281_11_35
Type: CAZyme
Location: 54271 - 55059 (+)
Type: CAZyme
Location: 54271 - 55059 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp900552465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.