Cluster: MGYG000004271_CGC40
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004271
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004271_37 | MGYG000004271_37_8 | 7141 | 9492 | - | GH65 |
| STP | MGYG000004271_37 | MGYG000004271_37_9 | 9517 | 10413 | - | PIG-L |
| TC | MGYG000004271_37 | MGYG000004271_37_10 | 10440 | 11303 | - | 3.A.1.1.42 |
| TC | MGYG000004271_37 | MGYG000004271_37_11 | 11300 | 12202 | - | 3.A.1.1.28 |
| STP | MGYG000004271_37 | MGYG000004271_37_12 | 12294 | 13595 | - | SBP_bac_1 |
| TC | MGYG000004271_37 | MGYG000004271_37_13 | 13735 | 15465 | - | 8.A.59.2.1 |
Gene ID: MGYG000004271_37_8
Type: CAZyme
Location: 7141 - 9492 (-)
Type: CAZyme
Location: 7141 - 9492 (-)
Gene ID: MGYG000004271_37_9
Type: STP
Location: 9517 - 10413 (-)
Type: STP
Location: 9517 - 10413 (-)
Gene ID: MGYG000004271_37_10
Type: TC
Location: 10440 - 11303 (-)
Type: TC
Location: 10440 - 11303 (-)
Gene ID: MGYG000004271_37_11
Type: TC
Location: 11300 - 12202 (-)
Type: TC
Location: 11300 - 12202 (-)
Gene ID: MGYG000004271_37_12
Type: STP
Location: 12294 - 13595 (-)
Type: STP
Location: 12294 - 13595 (-)
Gene ID: MGYG000004271_37_13
Type: TC
Location: 13735 - 15465 (-)
Type: TC
Location: 13735 - 15465 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900542495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004271_37_9 | vegetarian > vegan | 1.12145 | 0.00079 |
| MGYG000004271_37_11 | vegetarian > vegan | 1.25952 | 0.00079 |
| MGYG000004271_37_13 | vegetarian > vegan | 1.05146 | 0.00079 |