Cluster: MGYG000004271_CGC39
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004271
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004271_36 | MGYG000004271_36_13 | 17627 | 20629 | + | GH3 |
| STP | MGYG000004271_36 | MGYG000004271_36_14 | 20891 | 21103 | + | FeoA |
| STP | MGYG000004271_36 | MGYG000004271_36_15 | 21194 | 21412 | + | FeoA |
| TC | MGYG000004271_36 | MGYG000004271_36_16 | 21558 | 23714 | + | 9.A.8.1.6 |
Gene ID: MGYG000004271_36_13
Type: CAZyme
Location: 17627 - 20629 (+)
Type: CAZyme
Location: 17627 - 20629 (+)
Gene ID: MGYG000004271_36_14
Type: STP
Location: 20891 - 21103 (+)
Type: STP
Location: 20891 - 21103 (+)
Gene ID: MGYG000004271_36_15
Type: STP
Location: 21194 - 21412 (+)
Type: STP
Location: 21194 - 21412 (+)
Gene ID: MGYG000004271_36_16
Type: TC
Location: 21558 - 23714 (+)
Type: TC
Location: 21558 - 23714 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900542495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004271_36_13 | vegetarian > vegan | 1.36251 | 0.00079 |
| MGYG000004271_36_14 | vegetarian > omnivore | 1.34369 | 0.01294 |
| MGYG000004271_36_15 | vegan > omnivore | 1.10049 | 0.04638 |