Cluster: MGYG000004271_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004271
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004271_16 | MGYG000004271_16_64 | 67174 | 68508 | + | 2.A.86.1.8 |
| pfam | MGYG000004271_16 | MGYG000004271_16_65 | 68515 | 71229 | + | TPR_6 | TPR_8 |
| CAZyme | MGYG000004271_16 | MGYG000004271_16_66 | 71289 | 73187 | + | CBM48 | GH13_9 |
| NULL(UNKNOWN) | MGYG000004271_16 | MGYG000004271_16_67 | 74023 | 74316 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004271_16 | MGYG000004271_16_68 | 74548 | 75159 | - | ABC2_membrane_5 |
| TC | MGYG000004271_16 | MGYG000004271_16_69 | 75156 | 76028 | - | 3.A.1.149.1 |
Gene ID: MGYG000004271_16_64
Type: TC
Location: 67174 - 68508 (+)
Type: TC
Location: 67174 - 68508 (+)
Gene ID: MGYG000004271_16_65
Type: pfam
Location: 68515 - 71229 (+)
Type: pfam
Location: 68515 - 71229 (+)
Gene ID: MGYG000004271_16_66
Type: CAZyme
Location: 71289 - 73187 (+)
Type: CAZyme
Location: 71289 - 73187 (+)
Gene ID: MGYG000004271_16_67
Type:
Location: 74023 - 74316 (-)
Type:
Location: 74023 - 74316 (-)
Gene ID: MGYG000004271_16_68
Type: pfam
Location: 74548 - 75159 (-)
Type: pfam
Location: 74548 - 75159 (-)
Gene ID: MGYG000004271_16_69
Type: TC
Location: 75156 - 76028 (-)
Type: TC
Location: 75156 - 76028 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900542495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004271_16_65 | vegetarian > vegan | 1.00052 | 0.00079 |
| MGYG000004271_16_68 | vegetarian > vegan | 1.62391 | 0.00079 |
| MGYG000004271_16_69 | vegetarian > vegan | 1.86068 | 0.00079 |