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Cluster: MGYG000004271_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004271_1 MGYG000004271_1_156 153065 155062 - GH13_14
TF MGYG000004271_1 MGYG000004271_1_157 155710 156720 - LacI
CAZyme MGYG000004271_1 MGYG000004271_1_158 157024 158520 + GH77
pfam MGYG000004271_1 MGYG000004271_1_159 158588 159877 + SBP_bac_1 | SBP_bac_8
TC MGYG000004271_1 MGYG000004271_1_160 159900 161360 + 3.A.1.1.27
TC MGYG000004271_1 MGYG000004271_1_161 161360 162235 + 3.A.1.1.27
CAZyme MGYG000004271_1 MGYG000004271_1_162 162462 164210 + GH13_36
TC MGYG000004271_1 MGYG000004271_1_163 164376 166106 + 1.B.52.2.1
STP MGYG000004271_1 MGYG000004271_1_164 166178 167782 - CbiA
TC MGYG000004271_1 MGYG000004271_1_165 168156 170234 + 3.A.16.1.2
Gene ID: MGYG000004271_1_156
Type: CAZyme
Location: 153065 - 155062 (-)
Gene ID: MGYG000004271_1_157
Type: TF
Location: 155710 - 156720 (-)
Gene ID: MGYG000004271_1_158
Type: CAZyme
Location: 157024 - 158520 (+)
Gene ID: MGYG000004271_1_159
Type: pfam
Location: 158588 - 159877 (+)
Gene ID: MGYG000004271_1_160
Type: TC
Location: 159900 - 161360 (+)
Gene ID: MGYG000004271_1_161
Type: TC
Location: 161360 - 162235 (+)
Gene ID: MGYG000004271_1_162
Type: CAZyme
Location: 162462 - 164210 (+)
Gene ID: MGYG000004271_1_163
Type: TC
Location: 164376 - 166106 (+)
Gene ID: MGYG000004271_1_164
Type: STP
Location: 166178 - 167782 (-)
Gene ID: MGYG000004271_1_165
Type: TC
Location: 168156 - 170234 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004271_1_157 vegetarian > vegan 1.15204 0.00079
MGYG000004271_1_163 vegetarian > vegan 1.18128 0.00079

🧭 Explore Read Mapping of CGC

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