Cluster: MGYG000004271_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004271
- CGC Family ID: CGCFAM_01456
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004271_14 | MGYG000004271_14_59 | 65315 | 68308 | + | GH3 |
| pfam | MGYG000004271_14 | MGYG000004271_14_60 | 68463 | 69818 | - | AAA_14 | DUF4143 |
| NULL(UNKNOWN) | MGYG000004271_14 | MGYG000004271_14_61 | 69998 | 71239 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004271_14 | MGYG000004271_14_62 | 71236 | 72117 | - | 3.A.1.148.3 |
Gene ID: MGYG000004271_14_59
Type: CAZyme
Location: 65315 - 68308 (+)
Type: CAZyme
Location: 65315 - 68308 (+)
Gene ID: MGYG000004271_14_60
Type: pfam
Location: 68463 - 69818 (-)
Type: pfam
Location: 68463 - 69818 (-)
Gene ID: MGYG000004271_14_61
Type:
Location: 69998 - 71239 (-)
Type:
Location: 69998 - 71239 (-)
Gene ID: MGYG000004271_14_62
Type: TC
Location: 71236 - 72117 (-)
Type: TC
Location: 71236 - 72117 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900542495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.