Cluster: MGYG000004271_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004271
- CGC Family ID: CGCFAM_00047
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004271_11 | MGYG000004271_11_29 | 34404 | 38537 | - | 2.A.6.3.6 |
| NULL(UNKNOWN) | MGYG000004271_11 | MGYG000004271_11_30 | 38724 | 38861 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004271_11 | MGYG000004271_11_31 | 39109 | 39969 | - | 3.A.1.1.38 |
| TC | MGYG000004271_11 | MGYG000004271_11_32 | 39996 | 40910 | - | 3.A.1.1.4 |
| NULL(UNKNOWN) | MGYG000004271_11 | MGYG000004271_11_33 | 41090 | 42496 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000004271_11 | MGYG000004271_11_34 | 42544 | 43569 | - | LacI |
| CAZyme | MGYG000004271_11 | MGYG000004271_11_35 | 44155 | 46599 | + | GH94 |
Gene ID: MGYG000004271_11_29
Type: TC
Location: 34404 - 38537 (-)
Type: TC
Location: 34404 - 38537 (-)
Gene ID: MGYG000004271_11_30
Type:
Location: 38724 - 38861 (-)
Type:
Location: 38724 - 38861 (-)
Gene ID: MGYG000004271_11_31
Type: TC
Location: 39109 - 39969 (-)
Type: TC
Location: 39109 - 39969 (-)
Gene ID: MGYG000004271_11_32
Type: TC
Location: 39996 - 40910 (-)
Type: TC
Location: 39996 - 40910 (-)
Gene ID: MGYG000004271_11_33
Type:
Location: 41090 - 42496 (-)
Type:
Location: 41090 - 42496 (-)
Gene ID: MGYG000004271_11_34
Type: TF
Location: 42544 - 43569 (-)
Type: TF
Location: 42544 - 43569 (-)
Gene ID: MGYG000004271_11_35
Type: CAZyme
Location: 44155 - 46599 (+)
Type: CAZyme
Location: 44155 - 46599 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900542495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.