Cluster: MGYG000004271_CGC24
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004271
- CGC Family ID: CGCFAM_00815
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004271_9 | MGYG000004271_9_89 | 97641 | 98786 | - | CE9 |
| NULL(UNKNOWN) | MGYG000004271_9 | MGYG000004271_9_90 | 98857 | 99678 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000004271_9 | MGYG000004271_9_91 | 99807 | 100883 | - | SBP_bac_3 |
| TC | MGYG000004271_9 | MGYG000004271_9_92 | 100975 | 101793 | - | 3.A.1.16.2 |
| TC | MGYG000004271_9 | MGYG000004271_9_93 | 101769 | 102554 | - | 3.A.1.17.1 |
| sulfatase | MGYG000004271_9 | MGYG000004271_9_94 | 102795 | 104192 | - | S1_8 |
| NULL(UNKNOWN) | MGYG000004271_9 | MGYG000004271_9_95 | 104272 | 105801 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004271_9 | MGYG000004271_9_96 | 105803 | 107320 | - | 2.A.80.1.1 |
Gene ID: MGYG000004271_9_89
Type: CAZyme
Location: 97641 - 98786 (-)
Type: CAZyme
Location: 97641 - 98786 (-)
Gene ID: MGYG000004271_9_90
Type:
Location: 98857 - 99678 (-)
Type:
Location: 98857 - 99678 (-)
Gene ID: MGYG000004271_9_91
Type: STP
Location: 99807 - 100883 (-)
Type: STP
Location: 99807 - 100883 (-)
Gene ID: MGYG000004271_9_92
Type: TC
Location: 100975 - 101793 (-)
Type: TC
Location: 100975 - 101793 (-)
Gene ID: MGYG000004271_9_93
Type: TC
Location: 101769 - 102554 (-)
Type: TC
Location: 101769 - 102554 (-)
Gene ID: MGYG000004271_9_94
Type: sulfatase
Location: 102795 - 104192 (-)
Type: sulfatase
Location: 102795 - 104192 (-)
Gene ID: MGYG000004271_9_95
Type:
Location: 104272 - 105801 (-)
Type:
Location: 104272 - 105801 (-)
Gene ID: MGYG000004271_9_96
Type: TC
Location: 105803 - 107320 (-)
Type: TC
Location: 105803 - 107320 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900542495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004271_9_89 | vegetarian > vegan | 1.19861 | 0.00079 |
| MGYG000004271_9_94 | vegetarian > omnivore | 1.25810 | 0.01294 |
| MGYG000004271_9_94 | vegetarian > vegan | 1.35610 | 0.00079 |
| MGYG000004271_9_95 | vegetarian > vegan | 1.40801 | 0.00079 |
| MGYG000004271_9_96 | vegetarian > omnivore | 2.07500 | 0.01294 |
| MGYG000004271_9_96 | vegetarian > vegan | 1.24875 | 0.00079 |