Cluster: MGYG000004271_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004271
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004271_9 | MGYG000004271_9_58 | 57048 | 58751 | - | 2.A.21.3.21 |
| NULL(UNKNOWN) | MGYG000004271_9 | MGYG000004271_9_59 | 59624 | 59719 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000004271_9 | MGYG000004271_9_60 | 60072 | 60941 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000004271_9 | MGYG000004271_9_61 | 60997 | 63561 | - | GH3 |
| TC | MGYG000004271_9 | MGYG000004271_9_62 | 63586 | 64941 | - | 2.A.2.3.4 |
Gene ID: MGYG000004271_9_58
Type: TC
Location: 57048 - 58751 (-)
Type: TC
Location: 57048 - 58751 (-)
Gene ID: MGYG000004271_9_59
Type:
Location: 59624 - 59719 (+)
Type:
Location: 59624 - 59719 (+)
Gene ID: MGYG000004271_9_60
Type: TF
Location: 60072 - 60941 (+)
Type: TF
Location: 60072 - 60941 (+)
Gene ID: MGYG000004271_9_61
Type: CAZyme
Location: 60997 - 63561 (-)
Type: CAZyme
Location: 60997 - 63561 (-)
Gene ID: MGYG000004271_9_62
Type: TC
Location: 63586 - 64941 (-)
Type: TC
Location: 63586 - 64941 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900542495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004271_9_61 | vegetarian > vegan | 1.09456 | 0.00079 |