Cluster: MGYG000004271_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004271
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004271_4 | MGYG000004271_4_52 | 58428 | 59258 | + | 3.A.1.104.1 |
| TC | MGYG000004271_4 | MGYG000004271_4_53 | 59271 | 60536 | + | 3.A.1.103.6 |
| CAZyme | MGYG000004271_4 | MGYG000004271_4_54 | 60605 | 63619 | + | GT2 | GT2 |
Gene ID: MGYG000004271_4_52
Type: TC
Location: 58428 - 59258 (+)
Type: TC
Location: 58428 - 59258 (+)
Gene ID: MGYG000004271_4_53
Type: TC
Location: 59271 - 60536 (+)
Type: TC
Location: 59271 - 60536 (+)
Gene ID: MGYG000004271_4_54
Type: CAZyme
Location: 60605 - 63619 (+)
Type: CAZyme
Location: 60605 - 63619 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900542495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004271_4_54 | vegetarian > vegan | 1.70943 | 0.00079 |