Cluster: MGYG000004271_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004271
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004271_1 | MGYG000004271_1_68 | 54647 | 55948 | + | 3.A.1.1.28 |
| TC | MGYG000004271_1 | MGYG000004271_1_69 | 55945 | 56820 | + | 3.A.1.1.45 |
| TC | MGYG000004271_1 | MGYG000004271_1_70 | 56817 | 57659 | + | 3.A.1.1.28 |
| CAZyme | MGYG000004271_1 | MGYG000004271_1_71 | 57695 | 60502 | + | GH36 |
| CAZyme | MGYG000004271_1 | MGYG000004271_1_72 | 60492 | 61970 | + | GH13_18 |
Gene ID: MGYG000004271_1_68
Type: TC
Location: 54647 - 55948 (+)
Type: TC
Location: 54647 - 55948 (+)
Gene ID: MGYG000004271_1_69
Type: TC
Location: 55945 - 56820 (+)
Type: TC
Location: 55945 - 56820 (+)
Gene ID: MGYG000004271_1_70
Type: TC
Location: 56817 - 57659 (+)
Type: TC
Location: 56817 - 57659 (+)
Gene ID: MGYG000004271_1_71
Type: CAZyme
Location: 57695 - 60502 (+)
Type: CAZyme
Location: 57695 - 60502 (+)
Gene ID: MGYG000004271_1_72
Type: CAZyme
Location: 60492 - 61970 (+)
Type: CAZyme
Location: 60492 - 61970 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900542495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.