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Cluster: MGYG000004262_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004262_24 MGYG000004262_24_8 6983 9148 - GH112
TC MGYG000004262_24 MGYG000004262_24_9 9204 10061 - 3.A.1.1.18
TC MGYG000004262_24 MGYG000004262_24_10 10077 10970 - 3.A.1.1.18
NULL(UNKNOWN) MGYG000004262_24 MGYG000004262_24_11 11189 12487 - NULL(UNKNOWN)
[View Structural Homologs]
TF MGYG000004262_24 MGYG000004262_24_12 12789 13631 + HTH_AraC | HTH_AraC
TC MGYG000004262_24 MGYG000004262_24_13 13814 15523 - 3.A.7.14.1
Gene ID: MGYG000004262_24_8
Type: CAZyme
Location: 6983 - 9148 (-)
Gene ID: MGYG000004262_24_9
Type: TC
Location: 9204 - 10061 (-)
Gene ID: MGYG000004262_24_10
Type: TC
Location: 10077 - 10970 (-)
Gene ID: MGYG000004262_24_11
Type:
Location: 11189 - 12487 (-)
Gene ID: MGYG000004262_24_12
Type: TF
Location: 12789 - 13631 (+)
Gene ID: MGYG000004262_24_13
Type: TC
Location: 13814 - 15523 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004262_24_9 vegan > omnivore 2.56673 0.01276
MGYG000004262_24_9 vegetarian > omnivore 2.56712 0.02987
MGYG000004262_24_10 vegan > omnivore 3.48163 0.01276
MGYG000004262_24_10 vegetarian > omnivore 1.64887 0.02987
MGYG000004262_24_11 vegan > omnivore 2.87852 0.02567
MGYG000004262_24_11 vegetarian > omnivore 1.14665 0.02987

🧭 Explore Read Mapping of CGC

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