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Cluster: MGYG000004262_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004262_14 MGYG000004262_14_11 9752 11467 - CBM34 | GH13_20
TC MGYG000004262_14 MGYG000004262_14_12 11464 12309 - 3.A.1.1.6
TC MGYG000004262_14 MGYG000004262_14_13 12309 13199 - 3.A.1.1.2
TC MGYG000004262_14 MGYG000004262_14_14 13212 14417 - 3.A.1.1.16
pfam MGYG000004262_14 MGYG000004262_14_15 14489 15655 - CBM26 | CBM26 | CBM26
TF MGYG000004262_14 MGYG000004262_14_16 16054 16485 + Rrf2
TC MGYG000004262_14 MGYG000004262_14_17 17042 18673 + 3.A.1.24.5
TC MGYG000004262_14 MGYG000004262_14_18 18739 19512 + 3.A.1.24.2
TC MGYG000004262_14 MGYG000004262_14_19 19502 20161 + 3.A.1.24.5
TC MGYG000004262_14 MGYG000004262_14_20 20199 20858 + 3.A.1.3.16
TC MGYG000004262_14 MGYG000004262_14_21 20839 21513 + 3.A.1.3.25
TC MGYG000004262_14 MGYG000004262_14_22 21516 22259 + 3.A.1.3.9
Gene ID: MGYG000004262_14_11
Type: CAZyme
Location: 9752 - 11467 (-)
Gene ID: MGYG000004262_14_12
Type: TC
Location: 11464 - 12309 (-)
Gene ID: MGYG000004262_14_13
Type: TC
Location: 12309 - 13199 (-)
Gene ID: MGYG000004262_14_14
Type: TC
Location: 13212 - 14417 (-)
Gene ID: MGYG000004262_14_15
Type: pfam
Location: 14489 - 15655 (-)
Gene ID: MGYG000004262_14_16
Type: TF
Location: 16054 - 16485 (+)
Gene ID: MGYG000004262_14_17
Type: TC
Location: 17042 - 18673 (+)
Gene ID: MGYG000004262_14_18
Type: TC
Location: 18739 - 19512 (+)
Gene ID: MGYG000004262_14_19
Type: TC
Location: 19502 - 20161 (+)
Gene ID: MGYG000004262_14_20
Type: TC
Location: 20199 - 20858 (+)
Gene ID: MGYG000004262_14_21
Type: TC
Location: 20839 - 21513 (+)
Gene ID: MGYG000004262_14_22
Type: TC
Location: 21516 - 22259 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004262_14_13 vegetarian > vegan 1.03183 0.00290

🧭 Explore Read Mapping of CGC

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