Cluster: MGYG000004259_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004259
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004259_6 | MGYG000004259_6_25 | 26890 | 27492 | - | GH23 |
| pfam | MGYG000004259_6 | MGYG000004259_6_26 | 27479 | 28156 | - | CoaE | CoaE |
| peptidase | MGYG000004259_6 | MGYG000004259_6_27 | 28166 | 28975 | - | C26.UPW |
| TC | MGYG000004259_6 | MGYG000004259_6_28 | 28990 | 29748 | - | 3.A.1.3.9 |
| TC | MGYG000004259_6 | MGYG000004259_6_29 | 29766 | 30617 | - | 3.A.1.3.9 |
| TC | MGYG000004259_6 | MGYG000004259_6_30 | 30614 | 31273 | - | 3.A.1.3.25 |
Gene ID: MGYG000004259_6_25
Type: CAZyme
Location: 26890 - 27492 (-)
Type: CAZyme
Location: 26890 - 27492 (-)
Gene ID: MGYG000004259_6_26
Type: pfam
Location: 27479 - 28156 (-)
Type: pfam
Location: 27479 - 28156 (-)
Gene ID: MGYG000004259_6_27
Type: peptidase
Location: 28166 - 28975 (-)
Type: peptidase
Location: 28166 - 28975 (-)
Gene ID: MGYG000004259_6_28
Type: TC
Location: 28990 - 29748 (-)
Type: TC
Location: 28990 - 29748 (-)
Gene ID: MGYG000004259_6_29
Type: TC
Location: 29766 - 30617 (-)
Type: TC
Location: 29766 - 30617 (-)
Gene ID: MGYG000004259_6_30
Type: TC
Location: 30614 - 31273 (-)
Type: TC
Location: 30614 - 31273 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Atopobium
Species
Atopobium minutum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.