Cluster: MGYG000004259_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004259
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004259_5 | MGYG000004259_5_37 | 41826 | 43379 | - | 2.A.118.1.7 |
| peptidase | MGYG000004259_5 | MGYG000004259_5_38 | 43718 | 46567 | - | C01.UNA |
| STP | MGYG000004259_5 | MGYG000004259_5_39 | 47024 | 47929 | - | PfkB |
| CAZyme | MGYG000004259_5 | MGYG000004259_5_40 | 48135 | 49175 | + | GT2 |
| TC | MGYG000004259_5 | MGYG000004259_5_41 | 49274 | 49642 | + | 9.B.55.2.1 |
| NULL(UNKNOWN) | MGYG000004259_5 | MGYG000004259_5_42 | 49642 | 51390 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004259_5 | MGYG000004259_5_43 | 51398 | 52387 | + | GT2 |
Gene ID: MGYG000004259_5_37
Type: TC
Location: 41826 - 43379 (-)
Type: TC
Location: 41826 - 43379 (-)
Gene ID: MGYG000004259_5_38
Type: peptidase
Location: 43718 - 46567 (-)
Type: peptidase
Location: 43718 - 46567 (-)
Gene ID: MGYG000004259_5_39
Type: STP
Location: 47024 - 47929 (-)
Type: STP
Location: 47024 - 47929 (-)
Gene ID: MGYG000004259_5_40
Type: CAZyme
Location: 48135 - 49175 (+)
Type: CAZyme
Location: 48135 - 49175 (+)
Gene ID: MGYG000004259_5_41
Type: TC
Location: 49274 - 49642 (+)
Type: TC
Location: 49274 - 49642 (+)
Gene ID: MGYG000004259_5_42
Type:
Location: 49642 - 51390 (+)
Type:
Location: 49642 - 51390 (+)
Gene ID: MGYG000004259_5_43
Type: CAZyme
Location: 51398 - 52387 (+)
Type: CAZyme
Location: 51398 - 52387 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Atopobium
Species
Atopobium minutum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.