Cluster: MGYG000004259_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004259
- CGC Family ID: CGCFAM_00325
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004259_5 | MGYG000004259_5_9 | 7058 | 8788 | - | 3.D.10.1.4 |
| TC | MGYG000004259_5 | MGYG000004259_5_10 | 9308 | 10879 | + | 3.A.1.5.38 |
| TC | MGYG000004259_5 | MGYG000004259_5_11 | 11008 | 11958 | + | 3.A.1.5.38 |
| TC | MGYG000004259_5 | MGYG000004259_5_12 | 11961 | 13973 | + | 3.A.1.5.35 |
| TC | MGYG000004259_5 | MGYG000004259_5_13 | 13970 | 14836 | + | 3.A.1.5.10 |
| CAZyme | MGYG000004259_5 | MGYG000004259_5_14 | 14916 | 15899 | + | CE7 |
| CAZyme | MGYG000004259_5 | MGYG000004259_5_15 | 15887 | 16822 | + | CE7 |
Gene ID: MGYG000004259_5_9
Type: TC
Location: 7058 - 8788 (-)
Type: TC
Location: 7058 - 8788 (-)
Gene ID: MGYG000004259_5_10
Type: TC
Location: 9308 - 10879 (+)
Type: TC
Location: 9308 - 10879 (+)
Gene ID: MGYG000004259_5_11
Type: TC
Location: 11008 - 11958 (+)
Type: TC
Location: 11008 - 11958 (+)
Gene ID: MGYG000004259_5_12
Type: TC
Location: 11961 - 13973 (+)
Type: TC
Location: 11961 - 13973 (+)
Gene ID: MGYG000004259_5_13
Type: TC
Location: 13970 - 14836 (+)
Type: TC
Location: 13970 - 14836 (+)
Gene ID: MGYG000004259_5_14
Type: CAZyme
Location: 14916 - 15899 (+)
Type: CAZyme
Location: 14916 - 15899 (+)
Gene ID: MGYG000004259_5_15
Type: CAZyme
Location: 15887 - 16822 (+)
Type: CAZyme
Location: 15887 - 16822 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Atopobium
Species
Atopobium minutum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.