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Cluster: MGYG000004258_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004258_8 MGYG000004258_8_32 35201 36370 - CE9
STP MGYG000004258_8 MGYG000004258_8_33 36490 37656 - SIS | SIS
TF MGYG000004258_8 MGYG000004258_8_34 37771 38502 - GntR
TC MGYG000004258_8 MGYG000004258_8_35 38688 39770 - 4.A.6.1.4
TC MGYG000004258_8 MGYG000004258_8_36 39760 40560 - 4.A.6.1.4
TC MGYG000004258_8 MGYG000004258_8_37 40651 41133 - 4.A.6.1.4
pfam MGYG000004258_8 MGYG000004258_8_38 41170 41451 - YajC
TC MGYG000004258_8 MGYG000004258_8_39 41451 41894 - 4.A.6.1.16
Gene ID: MGYG000004258_8_32
Type: CAZyme
Location: 35201 - 36370 (-)
Gene ID: MGYG000004258_8_33
Type: STP
Location: 36490 - 37656 (-)
Gene ID: MGYG000004258_8_34
Type: TF
Location: 37771 - 38502 (-)
Gene ID: MGYG000004258_8_35
Type: TC
Location: 38688 - 39770 (-)
Gene ID: MGYG000004258_8_36
Type: TC
Location: 39760 - 40560 (-)
Gene ID: MGYG000004258_8_37
Type: TC
Location: 40651 - 41133 (-)
Gene ID: MGYG000004258_8_38
Type: pfam
Location: 41170 - 41451 (-)
Gene ID: MGYG000004258_8_39
Type: TC
Location: 41451 - 41894 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004258_8_38 vegan > omnivore 1.04509 0.00863

🧭 Explore Read Mapping of CGC

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