Cluster: MGYG000004249_CGC2
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000004249
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004249_11 | MGYG000004249_11_19 | 13831 | 14775 | + | GT2 |
| CAZyme | MGYG000004249_11 | MGYG000004249_11_20 | 14789 | 15766 | + | GT2 |
| pfam | MGYG000004249_11 | MGYG000004249_11_21 | 15770 | 17173 | + | Wzy_C | O-antigen_lig |
| CAZyme | MGYG000004249_11 | MGYG000004249_11_22 | 17170 | 18261 | + | GT4 |
| CAZyme | MGYG000004249_11 | MGYG000004249_11_23 | 18263 | 19165 | + | GT2 |
| CAZyme | MGYG000004249_11 | MGYG000004249_11_24 | 19162 | 20250 | + | GT4 |
| TC | MGYG000004249_11 | MGYG000004249_11_25 | 20327 | 21079 | + | 3.A.1.103.4 |
| CAZyme | MGYG000004249_11 | MGYG000004249_11_26 | 21090 | 23480 | + | GT2 | GT4 |
| TC | MGYG000004249_11 | MGYG000004249_11_27 | 23477 | 24250 | + | 3.A.1.103.4 |
| CAZyme | MGYG000004249_11 | MGYG000004249_11_28 | 24254 | 25216 | + | GT2 |
| pfam | MGYG000004249_11 | MGYG000004249_11_29 | 25289 | 25759 | + | Alg14 |
| pfam | MGYG000004249_11 | MGYG000004249_11_30 | 25759 | 26658 | + | Glyco_tran_28_C | GtrA_DPMS_TM |
| TC | MGYG000004249_11 | MGYG000004249_11_31 | 26719 | 31290 | + | 3.A.7.17.1 |
Gene ID: MGYG000004249_11_19
Type: CAZyme
Location: 13831 - 14775 (+)
Type: CAZyme
Location: 13831 - 14775 (+)
Gene ID: MGYG000004249_11_20
Type: CAZyme
Location: 14789 - 15766 (+)
Type: CAZyme
Location: 14789 - 15766 (+)
Gene ID: MGYG000004249_11_21
Type: pfam
Location: 15770 - 17173 (+)
Type: pfam
Location: 15770 - 17173 (+)
Gene ID: MGYG000004249_11_22
Type: CAZyme
Location: 17170 - 18261 (+)
Type: CAZyme
Location: 17170 - 18261 (+)
Gene ID: MGYG000004249_11_23
Type: CAZyme
Location: 18263 - 19165 (+)
Type: CAZyme
Location: 18263 - 19165 (+)
Gene ID: MGYG000004249_11_24
Type: CAZyme
Location: 19162 - 20250 (+)
Type: CAZyme
Location: 19162 - 20250 (+)
Gene ID: MGYG000004249_11_25
Type: TC
Location: 20327 - 21079 (+)
Type: TC
Location: 20327 - 21079 (+)
Gene ID: MGYG000004249_11_26
Type: CAZyme
Location: 21090 - 23480 (+)
Type: CAZyme
Location: 21090 - 23480 (+)
Gene ID: MGYG000004249_11_27
Type: TC
Location: 23477 - 24250 (+)
Type: TC
Location: 23477 - 24250 (+)
Gene ID: MGYG000004249_11_28
Type: CAZyme
Location: 24254 - 25216 (+)
Type: CAZyme
Location: 24254 - 25216 (+)
Gene ID: MGYG000004249_11_29
Type: pfam
Location: 25289 - 25759 (+)
Type: pfam
Location: 25289 - 25759 (+)
Gene ID: MGYG000004249_11_30
Type: pfam
Location: 25759 - 26658 (+)
Type: pfam
Location: 25759 - 26658 (+)
Gene ID: MGYG000004249_11_31
Type: TC
Location: 26719 - 31290 (+)
Type: TC
Location: 26719 - 31290 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UMGS2016
Species
UMGS2016 sp900557185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.