Cluster: MGYG000004236_CGC12
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004236
- CGC Family ID: CGCFAM_04924
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004236_9 | MGYG000004236_9_26 | 37541 | 38824 | + | GH18 |
| NULL(UNKNOWN) | MGYG000004236_9 | MGYG000004236_9_27 | 39335 | 39775 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004236_9 | MGYG000004236_9_28 | 39907 | 41139 | + | 2.A.49.9.3 |
| CAZyme | MGYG000004236_9 | MGYG000004236_9_29 | 41572 | 42669 | - | GT2 |
| STP | MGYG000004236_9 | MGYG000004236_9_30 | 42757 | 42945 | - | Fer4 |
| CAZyme | MGYG000004236_9 | MGYG000004236_9_31 | 42958 | 44430 | - | CE4 |
| pfam | MGYG000004236_9 | MGYG000004236_9_32 | 44505 | 45506 | - | SPL |
| pfam | MGYG000004236_9 | MGYG000004236_9_33 | 45611 | 45949 | - | CGGC |
| TC | MGYG000004236_9 | MGYG000004236_9_34 | 45946 | 46716 | - | 3.A.1.14.1 |
| TC | MGYG000004236_9 | MGYG000004236_9_35 | 46713 | 47792 | - | 3.A.1.14.5 |
| STP | MGYG000004236_9 | MGYG000004236_9_36 | 47794 | 48813 | - | Peripla_BP_2 |
| STP | MGYG000004236_9 | MGYG000004236_9_37 | 49301 | 50212 | - | Pyr_redox_2 |
| TC | MGYG000004236_9 | MGYG000004236_9_38 | 50636 | 51985 | - | 2.A.26.1.1 |
| TF | MGYG000004236_9 | MGYG000004236_9_39 | 52153 | 53046 | - | HTH_1 |
| pfam | MGYG000004236_9 | MGYG000004236_9_40 | 53160 | 54215 | + | Cons_hypoth698 |
| TC | MGYG000004236_9 | MGYG000004236_9_41 | 54246 | 55367 | - | 2.A.45.2.6 |
Gene ID: MGYG000004236_9_26
Type: CAZyme
Location: 37541 - 38824 (+)
Type: CAZyme
Location: 37541 - 38824 (+)
Gene ID: MGYG000004236_9_27
Type:
Location: 39335 - 39775 (+)
Type:
Location: 39335 - 39775 (+)
Gene ID: MGYG000004236_9_28
Type: TC
Location: 39907 - 41139 (+)
Type: TC
Location: 39907 - 41139 (+)
Gene ID: MGYG000004236_9_29
Type: CAZyme
Location: 41572 - 42669 (-)
Type: CAZyme
Location: 41572 - 42669 (-)
Gene ID: MGYG000004236_9_30
Type: STP
Location: 42757 - 42945 (-)
Type: STP
Location: 42757 - 42945 (-)
Gene ID: MGYG000004236_9_31
Type: CAZyme
Location: 42958 - 44430 (-)
Type: CAZyme
Location: 42958 - 44430 (-)
Gene ID: MGYG000004236_9_32
Type: pfam
Location: 44505 - 45506 (-)
Type: pfam
Location: 44505 - 45506 (-)
Gene ID: MGYG000004236_9_33
Type: pfam
Location: 45611 - 45949 (-)
Type: pfam
Location: 45611 - 45949 (-)
Gene ID: MGYG000004236_9_34
Type: TC
Location: 45946 - 46716 (-)
Type: TC
Location: 45946 - 46716 (-)
Gene ID: MGYG000004236_9_35
Type: TC
Location: 46713 - 47792 (-)
Type: TC
Location: 46713 - 47792 (-)
Gene ID: MGYG000004236_9_36
Type: STP
Location: 47794 - 48813 (-)
Type: STP
Location: 47794 - 48813 (-)
Gene ID: MGYG000004236_9_37
Type: STP
Location: 49301 - 50212 (-)
Type: STP
Location: 49301 - 50212 (-)
Gene ID: MGYG000004236_9_38
Type: TC
Location: 50636 - 51985 (-)
Type: TC
Location: 50636 - 51985 (-)
Gene ID: MGYG000004236_9_39
Type: TF
Location: 52153 - 53046 (-)
Type: TF
Location: 52153 - 53046 (-)
Gene ID: MGYG000004236_9_40
Type: pfam
Location: 53160 - 54215 (+)
Type: pfam
Location: 53160 - 54215 (+)
Gene ID: MGYG000004236_9_41
Type: TC
Location: 54246 - 55367 (-)
Type: TC
Location: 54246 - 55367 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1071
Species
UMGS1071 sp900542375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.