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Cluster: MGYG000004233_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004233_12 MGYG000004233_12_2 1210 2091 + 2.A.115.1.1
TF MGYG000004233_12 MGYG000004233_12_3 2205 3800 + HTH_AraC
TC MGYG000004233_12 MGYG000004233_12_4 4012 4947 + 3.A.1.1.10
TC MGYG000004233_12 MGYG000004233_12_5 4962 5876 + 3.A.1.1.10
STP MGYG000004233_12 MGYG000004233_12_6 6008 7639 + SBP_bac_1
STP MGYG000004233_12 MGYG000004233_12_7 7781 9484 + HATPase_c
CAZyme MGYG000004233_12 MGYG000004233_12_8 9828 11309 + GH77
TF MGYG000004233_12 MGYG000004233_12_9 11328 12356 + LacI
CAZyme MGYG000004233_12 MGYG000004233_12_10 12433 14715 + GT35
TC MGYG000004233_12 MGYG000004233_12_11 14926 16722 + 8.A.59.2.1
TF MGYG000004233_12 MGYG000004233_12_12 16697 18181 + HTH_AraC
STP MGYG000004233_12 MGYG000004233_12_13 18329 19639 + SBP_bac_1
TC MGYG000004233_12 MGYG000004233_12_14 19673 20584 + 3.A.1.1.11
TC MGYG000004233_12 MGYG000004233_12_15 20595 21446 + 3.A.1.1.11
pfam MGYG000004233_12 MGYG000004233_12_16 21568 22722 + GFO_IDH_MocA | GFO_IDH_MocA_C | F420_oxidored | GFO_IDH_MocA_C3
pfam MGYG000004233_12 MGYG000004233_12_17 22734 23582 + AP_endonuc_2
CAZyme MGYG000004233_12 MGYG000004233_12_18 23608 26085 + GH2
Gene ID: MGYG000004233_12_2
Type: TC
Location: 1210 - 2091 (+)
Gene ID: MGYG000004233_12_3
Type: TF
Location: 2205 - 3800 (+)
Gene ID: MGYG000004233_12_4
Type: TC
Location: 4012 - 4947 (+)
Gene ID: MGYG000004233_12_5
Type: TC
Location: 4962 - 5876 (+)
Gene ID: MGYG000004233_12_6
Type: STP
Location: 6008 - 7639 (+)
Gene ID: MGYG000004233_12_7
Type: STP
Location: 7781 - 9484 (+)
Gene ID: MGYG000004233_12_8
Type: CAZyme
Location: 9828 - 11309 (+)
Gene ID: MGYG000004233_12_9
Type: TF
Location: 11328 - 12356 (+)
Gene ID: MGYG000004233_12_10
Type: CAZyme
Location: 12433 - 14715 (+)
Gene ID: MGYG000004233_12_11
Type: TC
Location: 14926 - 16722 (+)
Gene ID: MGYG000004233_12_12
Type: TF
Location: 16697 - 18181 (+)
Gene ID: MGYG000004233_12_13
Type: STP
Location: 18329 - 19639 (+)
Gene ID: MGYG000004233_12_14
Type: TC
Location: 19673 - 20584 (+)
Gene ID: MGYG000004233_12_15
Type: TC
Location: 20595 - 21446 (+)
Gene ID: MGYG000004233_12_16
Type: pfam
Location: 21568 - 22722 (+)
Gene ID: MGYG000004233_12_17
Type: pfam
Location: 22734 - 23582 (+)
Gene ID: MGYG000004233_12_18
Type: CAZyme
Location: 23608 - 26085 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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