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Cluster: MGYG000004233_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004233_1 MGYG000004233_1_84 80765 81574 - 3.A.1.1.4
TC MGYG000004233_1 MGYG000004233_1_85 81571 82455 - 3.A.1.1.4
TC MGYG000004233_1 MGYG000004233_1_86 82571 83908 - 3.A.1.1.4
TF MGYG000004233_1 MGYG000004233_1_87 84130 85035 - HTH_AraC | HTH_AraC
TC MGYG000004233_1 MGYG000004233_1_88 85155 87791 - 3.A.3.2.28
pfam MGYG000004233_1 MGYG000004233_1_89 87867 88406 - YgbB
pfam MGYG000004233_1 MGYG000004233_1_90 88545 89819 - Fe-ADH_2
CAZyme MGYG000004233_1 MGYG000004233_1_91 89850 90866 - GT2
Gene ID: MGYG000004233_1_84
Type: TC
Location: 80765 - 81574 (-)
Gene ID: MGYG000004233_1_85
Type: TC
Location: 81571 - 82455 (-)
Gene ID: MGYG000004233_1_86
Type: TC
Location: 82571 - 83908 (-)
Gene ID: MGYG000004233_1_87
Type: TF
Location: 84130 - 85035 (-)
Gene ID: MGYG000004233_1_88
Type: TC
Location: 85155 - 87791 (-)
Gene ID: MGYG000004233_1_89
Type: pfam
Location: 87867 - 88406 (-)
Gene ID: MGYG000004233_1_90
Type: pfam
Location: 88545 - 89819 (-)
Gene ID: MGYG000004233_1_91
Type: CAZyme
Location: 89850 - 90866 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004233_1_85 vegan > omnivore 1.69210 0.03707

🧭 Explore Read Mapping of CGC

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