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Cluster: MGYG000004233_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004233_11 MGYG000004233_11_3 4217 5725 + 3.A.1.2.3
TC MGYG000004233_11 MGYG000004233_11_4 5744 7399 + 3.A.1.2.3
TF MGYG000004233_11 MGYG000004233_11_5 7588 9198 + HTH_AraC | HTH_AraC
TC MGYG000004233_11 MGYG000004233_11_6 9188 11053 + 9.B.33.1.1
STP MGYG000004233_11 MGYG000004233_11_7 11094 12014 + Peripla_BP_1
TC MGYG000004233_11 MGYG000004233_11_8 12056 13096 + 3.A.1.2.3
TF MGYG000004233_11 MGYG000004233_11_9 13169 13945 - 0043707
CAZyme MGYG000004233_11 MGYG000004233_11_10 14173 16137 - GH127
TF MGYG000004233_11 MGYG000004233_11_11 16278 17078 + HTH_AraC | HTH_AraC
STP MGYG000004233_11 MGYG000004233_11_12 17233 17466 + FeoA
TC MGYG000004233_11 MGYG000004233_11_13 17459 19513 + 9.A.8.1.6
TF MGYG000004233_11 MGYG000004233_11_14 19518 20024 + HTH_11
TC MGYG000004233_11 MGYG000004233_11_15 20483 21058 + 3.A.2.1.5
TC MGYG000004233_11 MGYG000004233_11_16 21148 21369 + 3.A.2.1.5
pfam MGYG000004233_11 MGYG000004233_11_17 21419 21919 + ATP-synt_B
pfam MGYG000004233_11 MGYG000004233_11_18 21900 22403 + OSCP
TC MGYG000004233_11 MGYG000004233_11_19 22409 23920 + 3.A.2.1.5
TC MGYG000004233_11 MGYG000004233_11_20 23924 24814 + 3.A.2.1.5
TC MGYG000004233_11 MGYG000004233_11_21 24866 26263 + 3.A.2.1.5
Gene ID: MGYG000004233_11_3
Type: TC
Location: 4217 - 5725 (+)
Gene ID: MGYG000004233_11_4
Type: TC
Location: 5744 - 7399 (+)
Gene ID: MGYG000004233_11_5
Type: TF
Location: 7588 - 9198 (+)
Gene ID: MGYG000004233_11_6
Type: TC
Location: 9188 - 11053 (+)
Gene ID: MGYG000004233_11_7
Type: STP
Location: 11094 - 12014 (+)
Gene ID: MGYG000004233_11_8
Type: TC
Location: 12056 - 13096 (+)
Gene ID: MGYG000004233_11_9
Type: TF
Location: 13169 - 13945 (-)
Gene ID: MGYG000004233_11_10
Type: CAZyme
Location: 14173 - 16137 (-)
Gene ID: MGYG000004233_11_11
Type: TF
Location: 16278 - 17078 (+)
Gene ID: MGYG000004233_11_12
Type: STP
Location: 17233 - 17466 (+)
Gene ID: MGYG000004233_11_13
Type: TC
Location: 17459 - 19513 (+)
Gene ID: MGYG000004233_11_14
Type: TF
Location: 19518 - 20024 (+)
Gene ID: MGYG000004233_11_15
Type: TC
Location: 20483 - 21058 (+)
Gene ID: MGYG000004233_11_16
Type: TC
Location: 21148 - 21369 (+)
Gene ID: MGYG000004233_11_17
Type: pfam
Location: 21419 - 21919 (+)
Gene ID: MGYG000004233_11_18
Type: pfam
Location: 21900 - 22403 (+)
Gene ID: MGYG000004233_11_19
Type: TC
Location: 22409 - 23920 (+)
Gene ID: MGYG000004233_11_20
Type: TC
Location: 23924 - 24814 (+)
Gene ID: MGYG000004233_11_21
Type: TC
Location: 24866 - 26263 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004233_11_16 vegan > omnivore 1.86940 0.00548

🧭 Explore Read Mapping of CGC

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