Cluster: MGYG000004233_CGC18
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 7
- Substrate: beta-mannan
- Genome ID: MGYG000004233
- CGC Family ID: CGCFAM_00226
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004233_9 | MGYG000004233_9_35 | 37620 | 38564 | - | GH113 |
| CAZyme | MGYG000004233_9 | MGYG000004233_9_36 | 38611 | 39969 | - | GH1 |
| pfam | MGYG000004233_9 | MGYG000004233_9_37 | 40016 | 41740 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | MGYG000004233_9 | MGYG000004233_9_38 | 41777 | 42880 | - | CBM35inCE17 | CE17 |
| CAZyme | MGYG000004233_9 | MGYG000004233_9_39 | 42938 | 43996 | - | CE2 |
| NULL(UNKNOWN) | MGYG000004233_9 | MGYG000004233_9_40 | 43993 | 44661 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004233_9 | MGYG000004233_9_41 | 44855 | 46018 | - | GH130_1 |
| pfam | MGYG000004233_9 | MGYG000004233_9_42 | 46011 | 47183 | - | GlcNAc_2-epim |
| CAZyme | MGYG000004233_9 | MGYG000004233_9_43 | 47195 | 48220 | - | GH130_2 |
| TC | MGYG000004233_9 | MGYG000004233_9_44 | 48246 | 49091 | - | 3.A.1.1.18 |
| TC | MGYG000004233_9 | MGYG000004233_9_45 | 49092 | 50084 | - | 3.A.1.1.7 |
| STP | MGYG000004233_9 | MGYG000004233_9_46 | 50179 | 51552 | - | SBP_bac_1 |
| TC | MGYG000004233_9 | MGYG000004233_9_47 | 51847 | 52452 | + | 9.B.28.1.3 |
| TF | MGYG000004233_9 | MGYG000004233_9_48 | 52596 | 53624 | - | LacI |
| TF | MGYG000004233_9 | MGYG000004233_9_49 | 53617 | 54651 | - | LacI |
| CAZyme | MGYG000004233_9 | MGYG000004233_9_50 | 54684 | 56861 | - | GH36 |
Gene ID: MGYG000004233_9_35
Type: CAZyme
Location: 37620 - 38564 (-)
Type: CAZyme
Location: 37620 - 38564 (-)
Gene ID: MGYG000004233_9_36
Type: CAZyme
Location: 38611 - 39969 (-)
Type: CAZyme
Location: 38611 - 39969 (-)
Gene ID: MGYG000004233_9_37
Type: pfam
Location: 40016 - 41740 (-)
Type: pfam
Location: 40016 - 41740 (-)
Gene ID: MGYG000004233_9_38
Type: CAZyme
Location: 41777 - 42880 (-)
Type: CAZyme
Location: 41777 - 42880 (-)
Gene ID: MGYG000004233_9_39
Type: CAZyme
Location: 42938 - 43996 (-)
Type: CAZyme
Location: 42938 - 43996 (-)
Gene ID: MGYG000004233_9_40
Type:
Location: 43993 - 44661 (-)
Type:
Location: 43993 - 44661 (-)
Gene ID: MGYG000004233_9_41
Type: CAZyme
Location: 44855 - 46018 (-)
Type: CAZyme
Location: 44855 - 46018 (-)
Gene ID: MGYG000004233_9_42
Type: pfam
Location: 46011 - 47183 (-)
Type: pfam
Location: 46011 - 47183 (-)
Gene ID: MGYG000004233_9_43
Type: CAZyme
Location: 47195 - 48220 (-)
Type: CAZyme
Location: 47195 - 48220 (-)
Gene ID: MGYG000004233_9_44
Type: TC
Location: 48246 - 49091 (-)
Type: TC
Location: 48246 - 49091 (-)
Gene ID: MGYG000004233_9_45
Type: TC
Location: 49092 - 50084 (-)
Type: TC
Location: 49092 - 50084 (-)
Gene ID: MGYG000004233_9_46
Type: STP
Location: 50179 - 51552 (-)
Type: STP
Location: 50179 - 51552 (-)
Gene ID: MGYG000004233_9_47
Type: TC
Location: 51847 - 52452 (+)
Type: TC
Location: 51847 - 52452 (+)
Gene ID: MGYG000004233_9_48
Type: TF
Location: 52596 - 53624 (-)
Type: TF
Location: 52596 - 53624 (-)
Gene ID: MGYG000004233_9_49
Type: TF
Location: 53617 - 54651 (-)
Type: TF
Location: 53617 - 54651 (-)
Gene ID: MGYG000004233_9_50
Type: CAZyme
Location: 54684 - 56861 (-)
Type: CAZyme
Location: 54684 - 56861 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fusicatenibacter
Species
Fusicatenibacter sp902493585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.