dbCAN Logo

Cluster: MGYG000004233_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004233_8 MGYG000004233_8_41 39950 41281 - GH4
pfam MGYG000004233_8 MGYG000004233_8_42 41299 42687 - MTTB
TC MGYG000004233_8 MGYG000004233_8_43 42694 43554 - 3.A.1.1.11
TC MGYG000004233_8 MGYG000004233_8_44 43566 44462 - 3.A.1.1.11
TC MGYG000004233_8 MGYG000004233_8_45 44501 45844 - 3.A.1.1.11
TC MGYG000004233_8 MGYG000004233_8_46 45933 47297 - 3.A.1.1.44
TC MGYG000004233_8 MGYG000004233_8_47 47544 49289 + 8.A.59.2.1
TF MGYG000004233_8 MGYG000004233_8_48 49326 50936 + HTH_AraC | HTH_AraC
pfam MGYG000004233_8 MGYG000004233_8_49 50933 52468 - Apiosidase | DUF5060 | DUF5605
CAZyme MGYG000004233_8 MGYG000004233_8_50 52499 54673 - CBM67 | GH78
pfam MGYG000004233_8 MGYG000004233_8_51 55071 55667 - Oxidored_FMN | Dus
TC MGYG000004233_8 MGYG000004233_8_52 55925 57553 - 8.A.7.1.1
CAZyme MGYG000004233_8 MGYG000004233_8_53 57761 59905 - GH13_39
Gene ID: MGYG000004233_8_41
Type: CAZyme
Location: 39950 - 41281 (-)
Gene ID: MGYG000004233_8_42
Type: pfam
Location: 41299 - 42687 (-)
Gene ID: MGYG000004233_8_43
Type: TC
Location: 42694 - 43554 (-)
Gene ID: MGYG000004233_8_44
Type: TC
Location: 43566 - 44462 (-)
Gene ID: MGYG000004233_8_45
Type: TC
Location: 44501 - 45844 (-)
Gene ID: MGYG000004233_8_46
Type: TC
Location: 45933 - 47297 (-)
Gene ID: MGYG000004233_8_47
Type: TC
Location: 47544 - 49289 (+)
Gene ID: MGYG000004233_8_48
Type: TF
Location: 49326 - 50936 (+)
Gene ID: MGYG000004233_8_49
Type: pfam
Location: 50933 - 52468 (-)
Gene ID: MGYG000004233_8_50
Type: CAZyme
Location: 52499 - 54673 (-)
Gene ID: MGYG000004233_8_51
Type: pfam
Location: 55071 - 55667 (-)
Gene ID: MGYG000004233_8_52
Type: TC
Location: 55925 - 57553 (-)
Gene ID: MGYG000004233_8_53
Type: CAZyme
Location: 57761 - 59905 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List