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Cluster: MGYG000004220_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004220_4 MGYG000004220_4_58 70984 72153 - CE9
STP MGYG000004220_4 MGYG000004220_4_59 72271 73437 - SIS | SIS
TF MGYG000004220_4 MGYG000004220_4_60 73552 74283 - GntR
TC MGYG000004220_4 MGYG000004220_4_61 74469 75551 - 4.A.6.1.4
TC MGYG000004220_4 MGYG000004220_4_62 75541 76341 - 4.A.6.1.4
TC MGYG000004220_4 MGYG000004220_4_63 76432 76914 - 4.A.6.1.4
pfam MGYG000004220_4 MGYG000004220_4_64 76951 77232 - YajC
TC MGYG000004220_4 MGYG000004220_4_65 77232 77675 - 4.A.6.1.16
Gene ID: MGYG000004220_4_58
Type: CAZyme
Location: 70984 - 72153 (-)
Gene ID: MGYG000004220_4_59
Type: STP
Location: 72271 - 73437 (-)
Gene ID: MGYG000004220_4_60
Type: TF
Location: 73552 - 74283 (-)
Gene ID: MGYG000004220_4_61
Type: TC
Location: 74469 - 75551 (-)
Gene ID: MGYG000004220_4_62
Type: TC
Location: 75541 - 76341 (-)
Gene ID: MGYG000004220_4_63
Type: TC
Location: 76432 - 76914 (-)
Gene ID: MGYG000004220_4_64
Type: pfam
Location: 76951 - 77232 (-)
Gene ID: MGYG000004220_4_65
Type: TC
Location: 77232 - 77675 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004220_4_64 vegan > omnivore 1.06642 0.00701

🧭 Explore Read Mapping of CGC

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