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Cluster: MGYG000004220_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004220_4 MGYG000004220_4_35 42933 43271 - 4.A.3.1.2
TF MGYG000004220_4 MGYG000004220_4_36 43486 44490 - LacI
TC MGYG000004220_4 MGYG000004220_4_37 44848 46614 + 4.A.3.1.1
CAZyme MGYG000004220_4 MGYG000004220_4_38 46681 48120 + GH1
TF MGYG000004220_4 MGYG000004220_4_39 48383 49420 - LacI
CAZyme MGYG000004220_4 MGYG000004220_4_40 49762 51204 + GH1
TC MGYG000004220_4 MGYG000004220_4_41 51381 53141 + 4.A.3.1.1
TF MGYG000004220_4 MGYG000004220_4_42 53475 54485 - LacI
TC MGYG000004220_4 MGYG000004220_4_43 54762 56549 + 4.A.3.1.1
CAZyme MGYG000004220_4 MGYG000004220_4_44 56625 58046 + GH1
pfam MGYG000004220_4 MGYG000004220_4_45 58414 59628 + Fic
STP MGYG000004220_4 MGYG000004220_4_46 59752 60147 - DeoRC
TC MGYG000004220_4 MGYG000004220_4_47 60310 62004 - 4.A.3.1.1
Gene ID: MGYG000004220_4_35
Type: TC
Location: 42933 - 43271 (-)
Gene ID: MGYG000004220_4_36
Type: TF
Location: 43486 - 44490 (-)
Gene ID: MGYG000004220_4_37
Type: TC
Location: 44848 - 46614 (+)
Gene ID: MGYG000004220_4_38
Type: CAZyme
Location: 46681 - 48120 (+)
Gene ID: MGYG000004220_4_39
Type: TF
Location: 48383 - 49420 (-)
Gene ID: MGYG000004220_4_40
Type: CAZyme
Location: 49762 - 51204 (+)
Gene ID: MGYG000004220_4_41
Type: TC
Location: 51381 - 53141 (+)
Gene ID: MGYG000004220_4_42
Type: TF
Location: 53475 - 54485 (-)
Gene ID: MGYG000004220_4_43
Type: TC
Location: 54762 - 56549 (+)
Gene ID: MGYG000004220_4_44
Type: CAZyme
Location: 56625 - 58046 (+)
Gene ID: MGYG000004220_4_45
Type: pfam
Location: 58414 - 59628 (+)
Gene ID: MGYG000004220_4_46
Type: STP
Location: 59752 - 60147 (-)
Gene ID: MGYG000004220_4_47
Type: TC
Location: 60310 - 62004 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004220_4_39 vegetarian > omnivore 1.02348 0.03181

🧭 Explore Read Mapping of CGC

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