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Cluster: MGYG000004213_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004213_17 MGYG000004213_17_22 21362 23110 - 8.A.46.2.2
TC MGYG000004213_17 MGYG000004213_17_23 23137 26325 - 1.B.14.6.2
NULL(UNKNOWN) MGYG000004213_17 MGYG000004213_17_24 27133 27402 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000004213_17 MGYG000004213_17_25 27554 28687 - GT4
NULL(UNKNOWN) MGYG000004213_17 MGYG000004213_17_26 28691 29830 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000004213_17 MGYG000004213_17_27 29835 30806 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004213_17 MGYG000004213_17_28 30811 31431 - 9.B.18.1.1
STP MGYG000004213_17 MGYG000004213_17_29 31431 32108 - PIG-L
pfam MGYG000004213_17 MGYG000004213_17_30 32111 33169 - EpsG
CAZyme MGYG000004213_17 MGYG000004213_17_31 33266 34207 - GT2
CAZyme MGYG000004213_17 MGYG000004213_17_32 34212 35285 - GT2
CAZyme MGYG000004213_17 MGYG000004213_17_33 35289 36497 - GT4
pfam MGYG000004213_17 MGYG000004213_17_34 36510 37580 - Epimerase_2
pfam MGYG000004213_17 MGYG000004213_17_35 37636 38493 - Epimerase | RmlD_sub_bind
TC MGYG000004213_17 MGYG000004213_17_36 38514 39563 - 9.B.18.2.1
Gene ID: MGYG000004213_17_22
Type: TC
Location: 21362 - 23110 (-)
Gene ID: MGYG000004213_17_23
Type: TC
Location: 23137 - 26325 (-)
Gene ID: MGYG000004213_17_24
Type:
Location: 27133 - 27402 (+)
Gene ID: MGYG000004213_17_25
Type: CAZyme
Location: 27554 - 28687 (-)
Gene ID: MGYG000004213_17_26
Type:
Location: 28691 - 29830 (-)
Gene ID: MGYG000004213_17_27
Type:
Location: 29835 - 30806 (-)
Gene ID: MGYG000004213_17_28
Type: TC
Location: 30811 - 31431 (-)
Gene ID: MGYG000004213_17_29
Type: STP
Location: 31431 - 32108 (-)
Gene ID: MGYG000004213_17_30
Type: pfam
Location: 32111 - 33169 (-)
Gene ID: MGYG000004213_17_31
Type: CAZyme
Location: 33266 - 34207 (-)
Gene ID: MGYG000004213_17_32
Type: CAZyme
Location: 34212 - 35285 (-)
Gene ID: MGYG000004213_17_33
Type: CAZyme
Location: 35289 - 36497 (-)
Gene ID: MGYG000004213_17_34
Type: pfam
Location: 36510 - 37580 (-)
Gene ID: MGYG000004213_17_35
Type: pfam
Location: 37636 - 38493 (-)
Gene ID: MGYG000004213_17_36
Type: TC
Location: 38514 - 39563 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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