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Cluster: MGYG000004209_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004209_1 MGYG000004209_1_116 143644 144813 - CE9
STP MGYG000004209_1 MGYG000004209_1_117 144933 146099 - SIS | SIS
TF MGYG000004209_1 MGYG000004209_1_118 146214 146945 - GntR
TC MGYG000004209_1 MGYG000004209_1_119 147130 148212 - 4.A.6.1.4
TC MGYG000004209_1 MGYG000004209_1_120 148202 149002 - 4.A.6.1.4
TC MGYG000004209_1 MGYG000004209_1_121 149093 149575 - 4.A.6.1.4
pfam MGYG000004209_1 MGYG000004209_1_122 149612 149893 - YajC
TC MGYG000004209_1 MGYG000004209_1_123 149893 150336 - 4.A.6.1.16
Gene ID: MGYG000004209_1_116
Type: CAZyme
Location: 143644 - 144813 (-)
Gene ID: MGYG000004209_1_117
Type: STP
Location: 144933 - 146099 (-)
Gene ID: MGYG000004209_1_118
Type: TF
Location: 146214 - 146945 (-)
Gene ID: MGYG000004209_1_119
Type: TC
Location: 147130 - 148212 (-)
Gene ID: MGYG000004209_1_120
Type: TC
Location: 148202 - 149002 (-)
Gene ID: MGYG000004209_1_121
Type: TC
Location: 149093 - 149575 (-)
Gene ID: MGYG000004209_1_122
Type: pfam
Location: 149612 - 149893 (-)
Gene ID: MGYG000004209_1_123
Type: TC
Location: 149893 - 150336 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004209_1_122 vegan > omnivore 1.01165 0.00701

🧭 Explore Read Mapping of CGC

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