Cluster: MGYG000004209_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004209
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004209_11 | MGYG000004209_11_22 | 30780 | 33107 | - | 9.A.8.1.6 |
| TC | MGYG000004209_11 | MGYG000004209_11_23 | 33231 | 33452 | - | 9.A.8.1.6 |
| STP | MGYG000004209_11 | MGYG000004209_11_24 | 33490 | 33732 | - | FeoA |
| STP | MGYG000004209_11 | MGYG000004209_11_25 | 33921 | 34169 | - | PTS-HPr |
| TC | MGYG000004209_11 | MGYG000004209_11_26 | 34591 | 36054 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000004209_11 | MGYG000004209_11_27 | 36208 | 36663 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004209_11 | MGYG000004209_11_28 | 36667 | 39675 | - | GH2 |
Gene ID: MGYG000004209_11_22
Type: TC
Location: 30780 - 33107 (-)
Type: TC
Location: 30780 - 33107 (-)
Gene ID: MGYG000004209_11_23
Type: TC
Location: 33231 - 33452 (-)
Type: TC
Location: 33231 - 33452 (-)
Gene ID: MGYG000004209_11_24
Type: STP
Location: 33490 - 33732 (-)
Type: STP
Location: 33490 - 33732 (-)
Gene ID: MGYG000004209_11_25
Type: STP
Location: 33921 - 34169 (-)
Type: STP
Location: 33921 - 34169 (-)
Gene ID: MGYG000004209_11_26
Type: TC
Location: 34591 - 36054 (-)
Type: TC
Location: 34591 - 36054 (-)
Gene ID: MGYG000004209_11_27
Type:
Location: 36208 - 36663 (-)
Type:
Location: 36208 - 36663 (-)
Gene ID: MGYG000004209_11_28
Type: CAZyme
Location: 36667 - 39675 (-)
Type: CAZyme
Location: 36667 - 39675 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902493375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.