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Cluster: MGYG000004208_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004208_12 MGYG000004208_12_33 38794 41049 + GH31
pfam MGYG000004208_12 MGYG000004208_12_34 41334 41732 - DUF4143
NULL(UNKNOWN) MGYG000004208_12 MGYG000004208_12_35 41738 41845 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004208_12 MGYG000004208_12_36 41927 42910 - 2.A.4.7.9
pfam MGYG000004208_12 MGYG000004208_12_37 43232 43486 + Ribosomal_S20p
TC MGYG000004208_12 MGYG000004208_12_38 43597 45162 + 3.D.10.1.4
TC MGYG000004208_12 MGYG000004208_12_39 45240 46886 + 9.B.174.1.1
pfam MGYG000004208_12 MGYG000004208_12_40 46883 50284 + DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter
TC MGYG000004208_12 MGYG000004208_12_41 50292 50738 - 1.A.22.1.1
pfam MGYG000004208_12 MGYG000004208_12_42 50934 51944 + Gp_dh_N | Gp_dh_C
TC MGYG000004208_12 MGYG000004208_12_43 52146 52904 - 3.D.10.1.5
TC MGYG000004208_12 MGYG000004208_12_44 52911 54908 - 3.D.10.1.5
NULL(UNKNOWN) MGYG000004208_12 MGYG000004208_12_45 54941 55969 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000004208_12 MGYG000004208_12_46 56628 57305 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004208_12 MGYG000004208_12_47 57478 60447 - 2.A.6.4.3
Gene ID: MGYG000004208_12_33
Type: CAZyme
Location: 38794 - 41049 (+)
Gene ID: MGYG000004208_12_34
Type: pfam
Location: 41334 - 41732 (-)
Gene ID: MGYG000004208_12_35
Type:
Location: 41738 - 41845 (-)
Gene ID: MGYG000004208_12_36
Type: TC
Location: 41927 - 42910 (-)
Gene ID: MGYG000004208_12_37
Type: pfam
Location: 43232 - 43486 (+)
Gene ID: MGYG000004208_12_38
Type: TC
Location: 43597 - 45162 (+)
Gene ID: MGYG000004208_12_39
Type: TC
Location: 45240 - 46886 (+)
Gene ID: MGYG000004208_12_40
Type: pfam
Location: 46883 - 50284 (+)
Gene ID: MGYG000004208_12_41
Type: TC
Location: 50292 - 50738 (-)
Gene ID: MGYG000004208_12_42
Type: pfam
Location: 50934 - 51944 (+)
Gene ID: MGYG000004208_12_43
Type: TC
Location: 52146 - 52904 (-)
Gene ID: MGYG000004208_12_44
Type: TC
Location: 52911 - 54908 (-)
Gene ID: MGYG000004208_12_45
Type:
Location: 54941 - 55969 (-)
Gene ID: MGYG000004208_12_46
Type:
Location: 56628 - 57305 (-)
Gene ID: MGYG000004208_12_47
Type: TC
Location: 57478 - 60447 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004208_12_42 vegetarian > vegan 1.03269 0.01882

🧭 Explore Read Mapping of CGC

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