Cluster: MGYG000004199_CGC7
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004199
- CGC Family ID: CGCFAM_05214
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004199_6 | MGYG000004199_6_9 | 12210 | 13937 | + | 8.A.59.2.1 |
| TF | MGYG000004199_6 | MGYG000004199_6_10 | 13941 | 15311 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000004199_6 | MGYG000004199_6_11 | 15382 | 16371 | + | 3.A.1.1.10 |
| TC | MGYG000004199_6 | MGYG000004199_6_12 | 16376 | 17290 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | MGYG000004199_6 | MGYG000004199_6_13 | 17304 | 19010 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004199_6 | MGYG000004199_6_14 | 19012 | 20928 | + | GH136 |
| CAZyme | MGYG000004199_6 | MGYG000004199_6_15 | 20947 | 22905 | + | GH136 |
| CAZyme | MGYG000004199_6 | MGYG000004199_6_16 | 22907 | 25147 | + | GH94 |
| TC | MGYG000004199_6 | MGYG000004199_6_17 | 25159 | 26574 | + | 3.A.1.1.26 |
| CAZyme | MGYG000004199_6 | MGYG000004199_6_18 | 26567 | 28651 | + | GH36 |
| pfam | MGYG000004199_6 | MGYG000004199_6_19 | 28726 | 30219 | + | CotH |
| CAZyme | MGYG000004199_6 | MGYG000004199_6_20 | 30216 | 31109 | + | GH43_24 |
| NULL(UNKNOWN) | MGYG000004199_6 | MGYG000004199_6_21 | 31112 | 32311 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004199_6 | MGYG000004199_6_22 | 32531 | 34516 | + | 3.A.1.201.19 |
| TC | MGYG000004199_6 | MGYG000004199_6_23 | 34500 | 36674 | + | 3.A.1.122.3 |
| TC | MGYG000004199_6 | MGYG000004199_6_24 | 36671 | 38617 | + | 3.A.1.106.15 |
| TC | MGYG000004199_6 | MGYG000004199_6_25 | 38601 | 40682 | + | 3.A.1.211.9 |
Gene ID: MGYG000004199_6_9
Type: TC
Location: 12210 - 13937 (+)
Type: TC
Location: 12210 - 13937 (+)
Gene ID: MGYG000004199_6_10
Type: TF
Location: 13941 - 15311 (+)
Type: TF
Location: 13941 - 15311 (+)
Gene ID: MGYG000004199_6_11
Type: TC
Location: 15382 - 16371 (+)
Type: TC
Location: 15382 - 16371 (+)
Gene ID: MGYG000004199_6_12
Type: TC
Location: 16376 - 17290 (+)
Type: TC
Location: 16376 - 17290 (+)
Gene ID: MGYG000004199_6_13
Type:
Location: 17304 - 19010 (+)
Type:
Location: 17304 - 19010 (+)
Gene ID: MGYG000004199_6_14
Type: CAZyme
Location: 19012 - 20928 (+)
Type: CAZyme
Location: 19012 - 20928 (+)
Gene ID: MGYG000004199_6_15
Type: CAZyme
Location: 20947 - 22905 (+)
Type: CAZyme
Location: 20947 - 22905 (+)
Gene ID: MGYG000004199_6_16
Type: CAZyme
Location: 22907 - 25147 (+)
Type: CAZyme
Location: 22907 - 25147 (+)
Gene ID: MGYG000004199_6_17
Type: TC
Location: 25159 - 26574 (+)
Type: TC
Location: 25159 - 26574 (+)
Gene ID: MGYG000004199_6_18
Type: CAZyme
Location: 26567 - 28651 (+)
Type: CAZyme
Location: 26567 - 28651 (+)
Gene ID: MGYG000004199_6_19
Type: pfam
Location: 28726 - 30219 (+)
Type: pfam
Location: 28726 - 30219 (+)
Gene ID: MGYG000004199_6_20
Type: CAZyme
Location: 30216 - 31109 (+)
Type: CAZyme
Location: 30216 - 31109 (+)
Gene ID: MGYG000004199_6_21
Type:
Location: 31112 - 32311 (+)
Type:
Location: 31112 - 32311 (+)
Gene ID: MGYG000004199_6_22
Type: TC
Location: 32531 - 34516 (+)
Type: TC
Location: 32531 - 34516 (+)
Gene ID: MGYG000004199_6_23
Type: TC
Location: 34500 - 36674 (+)
Type: TC
Location: 34500 - 36674 (+)
Gene ID: MGYG000004199_6_24
Type: TC
Location: 36671 - 38617 (+)
Type: TC
Location: 36671 - 38617 (+)
Gene ID: MGYG000004199_6_25
Type: TC
Location: 38601 - 40682 (+)
Type: TC
Location: 38601 - 40682 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Species
CAG-449 sp902493275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.