Cluster: MGYG000004199_CGC3
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000004199
- CGC Family ID: CGCFAM_02847
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004199_3 | MGYG000004199_3_6 | 7136 | 8212 | + | 3.A.1.1.36 |
| TC | MGYG000004199_3 | MGYG000004199_3_7 | 8194 | 9141 | + | 3.A.1.1.20 |
| CAZyme | MGYG000004199_3 | MGYG000004199_3_8 | 9150 | 10901 | + | GH2 |
| TC | MGYG000004199_3 | MGYG000004199_3_9 | 10913 | 13312 | + | 3.A.1.1.27 |
| CAZyme | MGYG000004199_3 | MGYG000004199_3_10 | 13317 | 15449 | + | GH43 |
| CAZyme | MGYG000004199_3 | MGYG000004199_3_11 | 15442 | 16662 | + | GH43_3 |
| CAZyme | MGYG000004199_3 | MGYG000004199_3_12 | 16665 | 17876 | + | GH43_3 |
| CAZyme | MGYG000004199_3 | MGYG000004199_3_13 | 17889 | 19631 | + | GH43 |
| CAZyme | MGYG000004199_3 | MGYG000004199_3_14 | 19634 | 22147 | + | GH43_32 |
| CAZyme | MGYG000004199_3 | MGYG000004199_3_15 | 22208 | 24391 | + | GH36 |
| pfam | MGYG000004199_3 | MGYG000004199_3_16 | 24573 | 26450 | + | SASA |
| CAZyme | MGYG000004199_3 | MGYG000004199_3_17 | 26468 | 27646 | + | GH43_33 |
Gene ID: MGYG000004199_3_6
Type: TC
Location: 7136 - 8212 (+)
Type: TC
Location: 7136 - 8212 (+)
Gene ID: MGYG000004199_3_7
Type: TC
Location: 8194 - 9141 (+)
Type: TC
Location: 8194 - 9141 (+)
Gene ID: MGYG000004199_3_8
Type: CAZyme
Location: 9150 - 10901 (+)
Type: CAZyme
Location: 9150 - 10901 (+)
Gene ID: MGYG000004199_3_9
Type: TC
Location: 10913 - 13312 (+)
Type: TC
Location: 10913 - 13312 (+)
Gene ID: MGYG000004199_3_10
Type: CAZyme
Location: 13317 - 15449 (+)
Type: CAZyme
Location: 13317 - 15449 (+)
Gene ID: MGYG000004199_3_11
Type: CAZyme
Location: 15442 - 16662 (+)
Type: CAZyme
Location: 15442 - 16662 (+)
Gene ID: MGYG000004199_3_12
Type: CAZyme
Location: 16665 - 17876 (+)
Type: CAZyme
Location: 16665 - 17876 (+)
Gene ID: MGYG000004199_3_13
Type: CAZyme
Location: 17889 - 19631 (+)
Type: CAZyme
Location: 17889 - 19631 (+)
Gene ID: MGYG000004199_3_14
Type: CAZyme
Location: 19634 - 22147 (+)
Type: CAZyme
Location: 19634 - 22147 (+)
Gene ID: MGYG000004199_3_15
Type: CAZyme
Location: 22208 - 24391 (+)
Type: CAZyme
Location: 22208 - 24391 (+)
Gene ID: MGYG000004199_3_16
Type: pfam
Location: 24573 - 26450 (+)
Type: pfam
Location: 24573 - 26450 (+)
Gene ID: MGYG000004199_3_17
Type: CAZyme
Location: 26468 - 27646 (+)
Type: CAZyme
Location: 26468 - 27646 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Species
CAG-449 sp902493275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.