Cluster: MGYG000004189_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004189
- CGC Family ID: CGCFAM_00272
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004189_2 | MGYG000004189_2_3 | 923 | 1486 | - | 2.A.107.1.2 |
| TC | MGYG000004189_2 | MGYG000004189_2_4 | 1483 | 2205 | - | 9.B.120.1.3 |
| TC | MGYG000004189_2 | MGYG000004189_2_5 | 2344 | 3735 | - | 2.A.1.21.22 |
| pfam | MGYG000004189_2 | MGYG000004189_2_6 | 3968 | 6127 | - | Helicase_C | UVR | ResIII | UvrB | UvrB_inter |
| CAZyme | MGYG000004189_2 | MGYG000004189_2_7 | 6348 | 8753 | - | GH3 |
Gene ID: MGYG000004189_2_3
Type: TC
Location: 923 - 1486 (-)
Type: TC
Location: 923 - 1486 (-)
Gene ID: MGYG000004189_2_4
Type: TC
Location: 1483 - 2205 (-)
Type: TC
Location: 1483 - 2205 (-)
Gene ID: MGYG000004189_2_5
Type: TC
Location: 2344 - 3735 (-)
Type: TC
Location: 2344 - 3735 (-)
Gene ID: MGYG000004189_2_6
Type: pfam
Location: 3968 - 6127 (-)
Type: pfam
Location: 3968 - 6127 (-)
Gene ID: MGYG000004189_2_7
Type: CAZyme
Location: 6348 - 8753 (-)
Type: CAZyme
Location: 6348 - 8753 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Slackia
Species
Slackia sp900553655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.